Evidence map›Paper›PMID 40978103›Full record

ArticleBladder cancer (Amsterdam, Netherlands)

Genetic susceptibility and environmental risk factors in bladder cancer: Evidence from the UK biobank.

Laura Bukavina, Ilaha Isali, Sneha Parekh, Sarah Psutka, Nicole Uzzo, Steven Leonard, Adam Calaway, Sunil Patel, Petros Grivas, Angela Jia and 9 more

Abstract read
In one paragraph

Article in Bladder cancer (Amsterdam, Netherlands). The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Laura BukavinaCleveland Clinic Glickman Urological Institute, Cleveland, OH, USA.ORCID https://orcid.org/0000-0001-7129-6230
Ilaha IsaliDepartment of Urology, Weil Cornell Medicine, New York, NY, USA.
Sneha ParekhCleveland Clinic Glickman Urological Institute, Cleveland, OH, USA.
Sarah PsutkaUniversity of Washington Medical Center, Fred Hutchinson Cancer Center, Seattle, WA, USA.ORCID https://orcid.org/0000-0002-4207-7490
Nicole UzzoFox Chase Cancer Center, Philadelphia, PA, USA.
Steven LeonardFox Chase Cancer Center, Philadelphia, PA, USA.
Adam CalawayUniversity Hospitals Cleveland Medical Center, Cleveland, OH, USA.
Sunil PatelThe Brady Urological Institute at Johns Hopkins, Baltimore, MD, USA.ORCID https://orcid.org/0000-0002-5045-0152
Petros GrivasUniversity of Washington Medical Center, Fred Hutchinson Cancer Center, Seattle, WA, USA.
Angela JiaUniversity Hospitals Cleveland Medical Center, Cleveland, OH, USA.ORCID https://orcid.org/0000-0002-0812-2614
Andres CorreaFox Chase Cancer Center, Philadelphia, PA, USA.
Jason R BrownUniversity Hospitals Cleveland Medical Center, Cleveland, OH, USA.ORCID https://orcid.org/0000-0001-6225-7555
Alexander KutikovFox Chase Cancer Center, Philadelphia, PA, USA.
Lee PonskyUniversity Hospitals Cleveland Medical Center, Cleveland, OH, USA.
Robert UzzoFox Chase Cancer Center, Philadelphia, PA, USA.
Mohit SindhaniCleveland Clinic Lerner College of Medicine, Cleveland, OH, USA.
James CattoUniversity of Sheffield Teaching Hospitals, Sheffield, UK.
Chen-Han Wilfred WuUniversity Hospitals Cleveland Medical Center, Cleveland, OH, USA.
Philip H AbboshFox Chase Cancer Center, Philadelphia, PA, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: This study aims to identify specific genotypes within the UK Biobank (UKB) cohort contributing to a genetic predisposition for bladder cancer (UBC). It highlighted the impact of environmental exposures and the broader role of certain genes in UBC development, offering a comprehensive understanding of the genetic basis for UBC susceptibility. Experimental Design: Leveraging the rich data from the UKB- a longitudinal study involving participants across the UK-the primary outcome was the presence of UBC, determined using ICD-10 and ICD-9 codes. The study employed rigorous Genome-Wide Association Study (GWAS) protocols, Phenome-Wide Association (PheWAS) frameworks, and gene-level pleiotropy analyses. Quality control measures were applied, such as single-nucleotide polymorphisms (SNP) missingness and minor allele frequency thresholds. Polygenic Risk Score (PRS) evaluations were also conducted based on the Mavaddat score using UKB's high-density genome-wide SNP dataset. Results: Our GWAS identified significant associations between UBC risk and genetic variants, notably in the PSCA and TERT genes. The UGT1A polymorphism was found to be protective against UBC, particularly in heavy smokers. The PheWAS framework linked UBC-predisposition polymorphisms to other conditions, such as prostate cancer. Conclusions: Our GWAS identified significant associations between UBC risk and genetic variants across loci, including PSCA, TERT, TACC3 and TMEM129. The protective effect of the UGT1A variant against UBC, especially concerning tobacco exposure, suggests the potential for genetic-based preventive strategies in UBC management.

Indexed as

environmental risk factorsgermline variantssmokingUBCurothelial carcinoma

Identifiers

PMID40978103
PMCPMC12444077

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.