Evidence map›Paper›PMID 40978044›Full record

ArticleFrontiers in oncology2025

Molecular clustering and prognostic features based on integrated databases predict survival and immune status in patients with gastric cancer.

Yin Shi, Jiaying Zhou, Keping Jia, Hao Song, Tianlong Zhang, Weiwei Yuan, Jiahao Ge

Abstract read
In one paragraph

Article in Frontiers in oncology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Development of a prognostic prediction model incorporatingJournal of gastrointestinal oncology · 2026
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yin Shi *Department of Hepatobiliary and Pancreatic Surgery, Jinhua Hospital Affiliated to Zhejiang University, Jinhua, Zhejiang, China.
Jiaying Zhou *Department of Internal Medicine, Yiwu Maternity And Children Hospital, Yiwu, Zhejiang, China.
Keping Jia *Department of Gastroenterology, the Fourth Affiliated Hospital of School of Medicine, and International School of Medicine, International Institutes of Medicine, Zhejiang University, Yiwu, China.
Hao SongDepartment of Traditional Chinese Medicine, Yiwu Maternity And Children Hospital, Yiwu, Zhejiang, China.
Tianlong ZhangDepartment of General Surgery, The First Affiliated Hospital of Anhui Medical University, Anhui Public Health Clinical Center, Hefei, China.
Weiwei YuanDepartment of Critical Care Medicine, the Fourth Affiliated Hospital of School of Medicine, and International School of Medicine, International Institutes of Medicine, Zhejiang University, Yiwu, China.
Jiahao GeDepartment of Thyroid Surgery, Baoshan Hospital Affiliated to Shanghai University of Traditional Chinese Medicine, Shanghai, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Gastric cancer (GC) remains one of the most common malignancies worldwide with high mortality rates despite advances in treatment approaches. Patients frequently develop drug resistance to current therapies, highlighting the critical need for novel prognostic biomarkers that can enhance survival rates and guide immunotherapy decisions in patients with GC. Methods: We conducted a comprehensive bioinformatics analysis using integrated clinical data from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) databases. GC cases were categorized into two prognostic-related gene (PRG) clusters, and differentially expressed genes were identified. We established a prognostic model based on 11 key genes, stratified patients into high-risk and low-risk groups, and developed a nomogram model for survival prediction. Expression of selected genes was validated through quantitative real-time polymerase chain reaction (qRT-PCR) and immunohistochemistry in clinical samples. Results: The identified PRGs and gene clusters strongly associated with patient survival, immune system functions, and cancer-related pathways. Risk scores significantly correlated with immune cell abundance, checkpoint expression, and responses to immunotherapy and chemotherapy. For instance, the area under the curve (AUC) values of patients at 1-year, 3-year, and 5-year survival were all greater than 0.6 in the ROC curves ( Conclusion: Our research establishes a robust molecular signature for predicting survival of patients with GC and characterizing the tumor immune microenvironment. It aims not only to establish a prognostic model, but also to explore immunobiological functions. The identified prognostic features and key genes (CTHRC1, CST6, and AKR1B1) offer potential as biomarkers and therapeutic targets, potentially guiding more effective personalized treatment strategies for patients with GC.

Indexed as

biomarkersgastric cancerimmune microenvironmentmolecular clusteringprognostic features

Identifiers

PMID40978044
PMCPMC12444767

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.