Evidence map›Paper›PMID 40977852›Full record

ArticleJournal of cell communication and signaling2025

An immunometabolism-related signature for renal clear cell carcinoma diagnosis and therapeutic target.

Guofan Hu, Jian Liang, Meiling Feng, Hansheng Lin, Jingwei He

Erratum issuedAbstract read
In one paragraph

Article in Journal of cell communication and signaling, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Guofan HuDepartment of Urology Guangdong Medical University Zhanjiang China.
Jian LiangDepartment of Urology Yangjiang People's Hospital Yangjiang China.
Meiling FengDepartment of Urology Yangjiang People's Hospital Yangjiang China.
Hansheng LinDepartment of Urology Yangjiang People's Hospital Yangjiang China.
Jingwei HeDepartment of Urology Yangjiang People's Hospital Yangjiang China.ORCID https://orcid.org/0009-0005-2737-1818

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Kidney renal clear cell carcinoma (KIRC) lacks sensitive early diagnostic markers and effective therapeutic guidance. Given the tight crosstalk between tumor metabolism and immunity, we investigated immunometabolism for biomarker discovery. Transcriptomes from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus were integrated. Immunometabolism-related genes were screened by weighted gene co-expression network analysis and differential expression, followed by three machine learning algorithms (least absolute shrinkage and selection operator, Support Vector Machine-Recursive Feature Elimination (SVM-RFE), and random forest) to select features and build a diagnostic model. Performance was validated in external cohorts. Multi-omics correlation, immune infiltration, drug-sensitivity, and survival analyses were conducted. Functional assays were performed in vitro and in vivo. Six biomarkers-ABCB1, Acyl-CoA Dehydrogenase Short/Branched Chain (ACADSB), PLA2G6, AKR1C3, PANK1, and Lactate Dehydrogenase B (LDHB)-were identified. The model showed strong discrimination (AUC 0.976 in TCGA; 0.902 in GSE126964; and 0.916 in GSE36895). The genes correlated with immune checkpoints, cytokine signaling, T-cell infiltration, and clinical parameters. Drug analyses suggested cisplatin and sunitinib downregulated oncogenic targets. Silencing ABCB1 or AKR1C3, or overexpressing LDHB, suppressed KIRC cell proliferation and migration in vitro; LDHB overexpression combined with sorafenib significantly reduced tumor growth in vivo. We propose a robust immunometabolism-based diagnostic model and six experimentally supported biomarkers for KIRC, providing mechanistic insight into tumor-immune interactions and potential avenues for personalized therapy.

Indexed as

biomarkersimmunometabolismkidney renal clear cell carcinomamachine learningsingle‐cell analysis

Identifiers

PMID40977852
PMCPMC12443813

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.