Evidence map›Paper›PMID 40974743›Full record

ArticleBiomaterials2026

Transcriptomic analysis of the physiological responses to injuries induced accompanying intracortical microelectrode implantation.

Johnathan R T Huff, Jaime Wang, Yue Gao, Zeynep E Yayci, E Ricky Chan, Allison Hess-Dunning, Jeffrey R Capadona

Abstract read
In one paragraph

Article in Biomaterials, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Johnathan R T HuffDepartment of Biomedical Engineering, Case Western Reserve University, 10900 Euclid Avenue, Cleveland, OH, 44106, United States; Advanced Platform Technology Center, Louis Stokes Cleveland Veterans Affairs Medical Center, 10901 East Blvd., Cleveland, OH, 44106, United States.
Jaime WangDepartment of Biomedical Engineering, Case Western Reserve University, 10900 Euclid Avenue, Cleveland, OH, 44106, United States; Advanced Platform Technology Center, Louis Stokes Cleveland Veterans Affairs Medical Center, 10901 East Blvd., Cleveland, OH, 44106, United States.
Yue GaoDepartment of Biomedical Engineering, Case Western Reserve University, 10900 Euclid Avenue, Cleveland, OH, 44106, United States.
Zeynep E YayciDepartment of Biomedical Engineering, Case Western Reserve University, 10900 Euclid Avenue, Cleveland, OH, 44106, United States.
E Ricky ChanCleveland Institute for Computational Biology, Case Western Reserve University, 2109 Adelbert Road, Cleveland, OH, 44106, United States.
Allison Hess-DunningDepartment of Biomedical Engineering, Case Western Reserve University, 10900 Euclid Avenue, Cleveland, OH, 44106, United States; Advanced Platform Technology Center, Louis Stokes Cleveland Veterans Affairs Medical Center, 10901 East Blvd., Cleveland, OH, 44106, United States. Electronic address: aeh19@case.edu.
Jeffrey R CapadonaDepartment of Biomedical Engineering, Case Western Reserve University, 10900 Euclid Avenue, Cleveland, OH, 44106, United States; Advanced Platform Technology Center, Louis Stokes Cleveland Veterans Affairs Medical Center, 10901 East Blvd., Cleveland, OH, 44106, United States. Electronic address: jrc35@case.edu.

Funding

Integrated Neural Engineering and Rehabilitation Training ProgramT32EB004314 · NIBIB · CASE WESTERN RESERVE UNIVERSITY · PI Jeffrey R Capadona, Robert F. Kirsch · 2004 to 2026
$6.1M
Effects of Iron Accumulation in Intracortical Implants and Protection by Iron ChelationR01NS126269 · NINDS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI Abhishek Prasad · 2023 to 2026
$2.2M
Deploying Intracortical Electrode Arrays to Record and Stimulate in a Tissue VolumeR01NS131502 · NINDS · TEXAS A&M UNIVERSITY · PI Taylor H Ware · 2023 to 2026
$1.9M
NIBIB NIH HHS T32 EB004314NINDS NIH HHS R01 NS126269NINDS NIH HHS R01 NS131502RRD VA IK6 RX003077
6 · The paper itself

Abstract

The neuroinflammatory response to intracortical microelectrodes (IMEs) is regarded as a major contributor to device performance degradation and failure. Iatrogenic injuries from the craniotomy, IME insertion, and the continued presence of the implanted device all evoke a temporally mediated neuroinflammatory response. Transcriptomic analyses have emerged as a highly sensitive and detailed approach to characterizing and quantifying the neuroinflammatory response to IME implantation. Therefore, we used transcriptomic analyses to update the historic characterization of the component injuries associated with IME devices to differentiate surgical and device-related contributions to neuroinflammation and provide an updated view of a decades-old problem. Four injury profiles - uninjured, craniotomy-only, stab wound, and implant - were applied to each rat in different locations corresponding to traditional IME placement. At 2, 8, or 16 weeks after surgery, tissue was extracted and processed using bulk transcriptomic analysis with a custom panel of 212 genes related to neuroinflammation and neuronal health. Many genes were significantly differentially expressed compared to naïve controls across time points, with highly similar gene and pathway profiles observed across the craniotomy-only, stab wound, and implant groups. Additionally, the uninjured tissue region also exhibited neuroinflammation-related gene expression changes. The results presented here suggest that the neuroinflammatory response due to the intracortical implant can extend to distal brain regions. The persistent and widespread neuroinflammatory response indicates a need for novel strategies to minimize the iatrogenic effects of neural implants and suggests that the placement of additional implants for increased tissue access may come at the cost of exacerbating neuroinflammation.

Indexed as

Electrodes, ImplantedGene Expression ProfilingTranscriptomeAnimalsCraniotomyMaleMicroelectrodesNeuroinflammatory DiseasesRatsRats, Sprague-Dawley

Identifiers

PMID40974743
PMCPMC13386284

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.