Evidence map›Paper›PMID 40973501›Full record

ReviewGenes & development2025

Transcription quality control at the promoter-proximal checkpoint.

Daniel Blears, Jesper Q Svejstrup

Abstract readReview
In one paragraph

Review in Genes & development, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Promoter proximal pausing of RNA polymerase across evolution.Nature structural & molecular biology · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Daniel BlearsCenter for Gene Expression, Department of Cellular and Molecular Medicine, University of Copenhagen, Copenhagen N 2200, Denmark.
Jesper Q SvejstrupCenter for Gene Expression, Department of Cellular and Molecular Medicine, University of Copenhagen, Copenhagen N 2200, Denmark jsvejstrup@sund.ku.dk.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcription of protein-coding genes by RNA polymerase II involves a characteristic pausing event downstream from transcription start sites. Such promoter-proximal pausing likely represents a transcription checkpoint, which ensures proper assembly of a fully functional RNAPII elongation complex that is capable of transcribing through the chromatin environment, with correctly modified nascent pre-mRNA. Failure to negotiate this promoter-proximal checkpoint results in termination of transcription and removal of RNAPII from the DNA. This review summarizes current knowledge on the mechanisms that regulate promoter-proximal pausing, maturation of the elongation complex, and the decision of whether to license RNAPII for elongation or prematurely terminate transcription.

Indexed as

Gene Expression RegulationPromoter Regions, GeneticTranscription, GeneticAnimalsHumansRNA Polymerase IIRNA Polymerase IIDSIFintegratornegative elongation factor 1PAF1 complexpromoter-proximal pausingRNA polymerase IISPT5

Identifiers

PMID40973501
PMCPMC12667398

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.