Evidence map›Paper›PMID 40973465›Full record

ArticleMolecular biology and evolution2025

Chromosome-Level Genome Assembly of Eden's Whale Clarifies the Taxonomy and Speciation of Bryde's Whale Complex.

Yi-Tao Lin, Fan Hui, Wentao Han, Yi-Xuan Li, Bonnie Yuen Wai Heung, Chun Ming How, Shi Wang, Jian-Wen Qiu

Abstract read
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Article in Molecular biology and evolution, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

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0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Yi-Tao LinDepartment of Biology, Hong Kong Baptist University, Hong Kong SAR 999077, China.ORCID 0000-0003-0724-4326
Fan HuiDepartment of Biology, Hong Kong Baptist University, Hong Kong SAR 999077, China.ORCID 0009-0004-8609-4075
Wentao HanSouthern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou 511458, China.ORCID 0000-0003-1423-3975
Yi-Xuan LiDepartment of Biology, Hong Kong Baptist University, Hong Kong SAR 999077, China.ORCID 0000-0002-2023-2867
Bonnie Yuen Wai HeungDepartment of Biology, Hong Kong Baptist University, Hong Kong SAR 999077, China.ORCID 0009-0004-4799-4388
Chun Ming HowDepartment of Biology, Hong Kong Baptist University, Hong Kong SAR 999077, China.ORCID 0000-0001-5219-3826
Shi WangSouthern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou 511458, China.ORCID 0000-0002-9571-9864
Jian-Wen QiuDepartment of Biology, Hong Kong Baptist University, Hong Kong SAR 999077, China.ORCID 0000-0002-1541-9627

Funding

General Research Fund 12101021General Research Fund 12102222Hong Kong Special Administrative Region of ChinaSouthern Marine Science and Engineering Guangdong Laboratory (Guangzhou) GML20220018
6 · The paper itself

Abstract

Eden's whale (Balaenoptera edeni), a poorly understood baleen cetacean, has long been shrouded in taxonomic ambiguity due to limited genomic resources, obscuring its distinction from closely related species and its position within the cetacean Tree of Life. In this paper, we present a high-quality chromosomal-level genome of B. edeni and conduct comparative genomic analyses to address long-standing taxonomic confusion and elucidate speciation of balaenopterids. Our phylogenomic analysis and demographic reconstruction reveal that B. edeni is a distinct sister to Bryde's whale (Balaenoptera brydei), sharing a common ancestor that diverged approximately 7.84 million years ago during the late Miocene. Their genetic divergence exceeds typical intraspecific variation in whales, supporting the reinstatement of B. brydei as a valid species. Chromosomal syntenic analyses suggest that macro-fragment inversions contributed to speciation in balaenopterid whales and uncover unexpected large-scale complex genome rearrangements in Bryde's whale, offering novel insights into cetacean genome evolution. Functional enrichment analysis of inverted regions between B. edeni and Balaenoptera musculus indicates their predominant association with metabolism and biosynthesis, as well as responses to various substances, stress, and stimuli. These genomic resources for B. edeni not only lay a critical foundation for comparative genetic and evolutionary research of cetaceans but also advance our understanding of the taxonomy and evolutionary dynamics of the Bryde's whale complex, with broader implications for baleen whale conservation and biodiversity.

Indexed as

BalaenopteraGenetic SpeciationGenomeAnimalsChromosomesEvolution, MolecularPhylogenyBalaenopteracetaceanevolutionmarine mammalMysticeti

Identifiers

PMID40973465
PMCPMC12492004

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.