Evidence map›Paper›PMID 40973133›Full record

ArticleThe Journal of antimicrobial chemotherapy2025

Rapid replacement of blaKPC variant in ST11 carbapenem-resistant and hypervirulent Klebsiella pneumoniae contributed to ceftazidime/avibactam resistance during severe in vivo infection.

Ping Yang, Chao Liu, Jiajia Zheng, Juan Yi, Zhenchao Wu, Yun Tian, Pengcheng Du, Ming Lu, Ning Shen

Abstract read
In one paragraph

Article in The Journal of antimicrobial chemotherapy, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ping YangDepartment of Pulmonary and Critical Care Medicine, Peking University Third Hospital, Beijing, China.
Chao LiuDepartment of Infectious Diseases, Peking University Third Hospital, Beijing, China.ORCID 0000-0001-5886-4264
Jiajia ZhengDepartment of Laboratory Medicine, Peking University Third Hospital, Beijing, China.
Juan YiDepartment of Pulmonary and Critical Care Medicine, Peking University Third Hospital, Beijing, China.
Zhenchao WuDepartment of Pulmonary and Critical Care Medicine, Peking University Third Hospital, Beijing, China.
Yun TianDepartment of Orthopaedics, Peking University Third Hospital, Beijing, China.
Pengcheng DuMedical Research Center, Beijing Institute of Respiratory Medicine and Beijing Chao-Yang Hospital, Capital Medical University, Beijing, China.
Ming LuDepartment of Pulmonary and Critical Care Medicine, Peking University Third Hospital, Beijing, China.
Ning ShenDepartment of Pulmonary and Critical Care Medicine, Peking University Third Hospital, Beijing, China.

Funding

Clinical Key Program of Peking University Third Hospital BYSYZD2022007National Key R&D Program of China 2022YFC2303201National Natural Science Foundation of China 82200012Peking University Clinical Scientist Training Program BMU2024PYJH011
6 · The paper itself

Abstract

objectivesHypervirulent ceftazidime/avibactam (CAZ/AVI)-resistant Klebsiella pneumoniae (Kp) has emerged; however, its dynamic within-host evolution and competitive features are uncharacterized. This study aimed to clarify the systematic microevolution characteristics of the rapid transformation of blaKPC variants during long-term infection.

methodsThirty-nine Kp strains were isolated from a single patient with severe recurrent osteomyelitis during a 2-year period. Whole-genome sequencing and in vitro evolution assay was performed. Microbiological characteristics were examined through antimicrobial susceptibility testing, plasmid stability, growth curve, in vitro competition and Galleria mellonella larvae lethality assays.

resultsAmong all the clinical Kp isolates, 37 were carbapenem-resistant Kp (CRKP), including 25 CAZ-/AVI-resistant Kp. All isolates belonged to the ST11-K47. During in vivo evolution, the blaKPC variant and its amplification emerged. Twenty-four isolates (24/39, 61.5%) harboured a novel blaKPC variant, blaKPC-144. All five Kp isolates carried blaKPC-2 in 2021. Surprisingly, 24 blaKPC-144-harbouring isolates (70.6%, 24/34) and 10 blaKPC-2-harboring isolates were identified in 2023, indicating rapid changing of blaKPC. Kp4 carried two copies of blaKPC-2, and Kp10-1 exhibited a 1.94-fold increase in the blaKPC-144 copy number. Similarly, in vitro, the blaKPC copy number increased upon exposure to low CAZ/AVI concentrations. However, at higher concentrations (4/1 mg/L), the blaKPC copy number increased significantly, and blaKPC mutations emerged simultaneously. The competition assay indicated that the blaKPC-144-harboring isolates exhibited a superior competitive capacity.

conclusionsThe blaKPC amplification and mutation emerged simultaneously or sequentially during in vivo and in vitro evolution. Kp isolates harbouring blaKPC-144, conferring resistance to CAZ/AVI, exhibited a competitive advantage, promoting the rapid replacement of blaKPC-2.

Indexed as

Anti-Bacterial AgentsAzabicyclo Compoundsbeta-LactamasesCarbapenem-Resistant EnterobacteriaceaeCeftazidimeDrug Resistance, Multiple, BacterialKlebsiella InfectionsKlebsiella pneumoniaeAnimalsBacterial ProteinsCarbapenemsDrug CombinationsHumansMaleMicrobial Sensitivity TestsMothsAnti-Bacterial Agentsavibactam, ceftazidime drug combinationAzabicyclo CompoundsBacterial Proteinsbeta-LactamasesCarbapenemsCeftazidimeDrug Combinations

Identifiers

PMID40973133
PMCPMC12598770

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.