Evidence map›Paper›PMID 40971841›Full record

ArticleToxicological sciences : an official journal of the Society of Toxicology2025

The OASIS Consortium: integrating multi-omics technologies to transform chemical safety assessment.

David Rouquié, Andreas Bender, Jaime Cheah, Christine E Crute, Deidre Dalmas, Jessica Ewald, Aaron Fullerton, Joshua A Harrill, Sabah Kadri, Nicole Kleinstreuer and 6 more

Abstract read
In one paragraph

Article in Toxicological sciences : an official journal of the Society of Toxicology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

David RouquiéToxicology Data Science, Bayer SAS Crop Science Division, Sophia Antipolis, 06906, France.
Andreas BenderCollege of Medicine and Health Sciences, Khalifa University of Science and Technology, Abu Dhabi, P.O. Box 127788, United Arab Emirates.
Jaime CheahCenter for the Development of Therapeutics, Broad Institute of MIT and Harvard, Cambridge, MA 02142, United States.ORCID 0000-0003-4455-4219
Christine E CruteHealth and Environmental Sciences Institute, Washington, DC 20005, United States.ORCID 0000-0003-4400-505X
Deidre DalmasIndependent, Collegeville, PA 19426, United States.ORCID 0000-0003-3641-139X
Jessica EwaldImaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA 02142, United States.
Aaron FullertonInvestigative Toxicology, Genentech, Inc, South San Francisco, CA 94080, United States.ORCID 0009-0005-9380-9419
Joshua A HarrillBiomolecular and Computational Toxicology Division, Center for Computational Toxicology & Exposure, Office of Research and Development, US Environmental Protection Agency, Durham, NC 27711, United States.ORCID 0000-0003-4317-6391
Sabah KadriAbbVie, North Chicago, IL 60064, United States.
Nicole KleinstreuerDivision of Program Coordination, Planning, and Strategic Initiatives, National Institutes of Health, Bethesda, MD 20892, United States.ORCID 0000-0002-7914-3682
Nynke KramerDivision of Toxicology, Wageningen University and Research, Wageningen, 6700 EA, The Netherlands.
Jessica LaRoccaCorteva Agriscience, Indianapolis, IN 46268, United States.
Constance A MitchellHealth and Environmental Sciences Institute, Washington, DC 20005, United States.ORCID 0000-0003-1052-7087
Srijit SealImaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA 02142, United States.
Shantanu SinghImaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA 02142, United States.
Anne E CarpenterImaging Platform, Broad Institute of MIT and Harvard, Cambridge, MA 02142, United States.

Funding

Opera Phenix high-throughput microplate confocal imager for high-content screeningS10OD026839 · OD · BROAD INSTITUTE, INC. · PI WAGNER, BRIDGET K · 2019 to 2019
$1.0M
Bits to Bytes Capital CallHealth and Environmental Sciences InstituteMassachusetts Life Sciences CenterNIH HHS S10 OD026839OASIS Consortium
6 · The paper itself

Abstract

Next Generation Risk Assessment (NGRA) aims to improve safety testing of pharmaceuticals, agrochemicals, and industrial chemicals. NGRA employs new approach methodologies, such as novel in vitro assays coupled with exposure modeling, to minimize the use of animal models, which can fail to predict specific biological effects in humans. The strategy of the 'Omics for Assessing Signatures for Integrated Safety (OASIS) Consortium combines multi-omics technologies (including transcriptomics, proteomics, and Cell Painting [high-content imaging]) and multiple cell model systems (ranging from simple cell cultures to complex organotypic models). By integrating these approaches with internal exposure estimates, the consortium aims to improve the translation between in vitro and in vivo test systems, ultimately enhancing the relevance of safety assessment to human biology. OASIS's integrated approach aims to better translate the biological effects across different chemical and biological spaces, starting with the liver as a use case. By using compounds with well-characterized in vivo and in vitro nonclinical safety and toxicology data related to adverse organ-specific effects in rats and humans, OASIS aims to create novel integrated methods that improve safety assessment while reducing animal use. Ideally, these efforts will contribute to regulatory science across sectors and support the adoption of more predictive, efficient, and cost-effective toxicological models.

Indexed as

Chemical SafetyGenomicsToxicity TestsAnimalsAnimal Testing AlternativesHumansMultiomicsProteomicsRisk AssessmentCell Paintinghepatotoxicitynew approach methodologies (NAMs)Next Generation Risk Assessment (NGRA)omics

Identifiers

PMID40971841
PMCPMC12646590

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.