Evidence map›Paper›PMID 40968606›Full record

ArticleCancer research and treatment2026

Tumor-Type-Specific Tumor Mutational Burden Cutoffs for Improved Immune Checkpoint Inhibitor Outcome Prediction: Large-Scale Analysis with Real-World Targeted Next-Generation Sequencing Data.

Ha Ra Jun, Ji-Young Lee, Changseon Lee, Sung-Min Chun

Abstract read
In one paragraph

Article in Cancer research and treatment, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Ha Ra JunDepartment of Medical Science, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea.
Ji-Young LeeAsan Center for Cancer Genome Discovery, Asan Institute for Life Science, Asan Medical Center, Seoul, Korea.
Changseon LeeSoftware Division, NGeneBio, Seoul, Korea.
Sung-Min ChunDepartment of Pathology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea. smchun@amc.seoul.kr.

Funding

Asan Institute for Life Sciences, Asan Medical Center 2019IP0836Asan Institute for Life Sciences, Asan Medical Center 2023IP0085NCIRD CDC HHS U51 IP000836NGeneBio 2024OM0254
6 · The paper itself

Abstract

Purpose: Tumor mutational burden (TMB) is a potential biomarker for predicting response to immune checkpoint inhibitors (ICIs). However, its clinical utility is limited by methodological inconsistencies. This study aimed to evaluate the predictive value of TMB for ICI outcomes using next-generation sequencing (NGS) data. Materials and Methods: We retrospectively analyzed 9,459 patients with cancer who underwent tumor-only targeted NGS. TMB-high (TMB-H) cutoffs were defined using an interquartile range (IQR)-based method and validated by comparing the overall survival (OS) and progression-free survival (PFS) in ICI-treated cohorts against both The Cancer Genome Atlas whole-exome sequencing-derived TMB and the universal 10 mutations per megabase (mut/Mb) cutoff. We also examined programmed cell death-ligand 1 (PD-L1) expression and subclonality to address response heterogeneity. Results: IQR-based TMB-H was significantly associated with longer PFS in the ICI-treated cohort (hazard ratio [HR], 0.85; 95% confidence interval [CI], 0.73 to 0.98; p=0.022), NGS before ICI subgroup (HR, 0.86; p=0.049), and pre-ICI subgroup (HR, 0.80; p=0.026). In contrast, the universal 10 mut/Mb cutoff showed no statistical significance. Subgroup analysis revealed significant PFS benefit in bladder (p=0.014), bowel (p=0.013), and uterine cancers (p=0.006). In lung cancer, patients with both TMB-H and very high PD-L1 expression (≥ 90%) had the longest PFS (HR, 0.64; 95% CI, 0.44 to 0.93; p=0.021). Among the TMB-H samples, high subclonality was associated with worse OS in non-hypermutated cases (p=0.032). Conclusion: Real-world TMB cutoffs derived from distribution-based methods offer improved predictive value for ICI outcomes. Integration of the PD-L1 expression and subclonality status further refines the predictive utility of TMB, improving precision in ICI treatment.

Indexed as

Biomarkers, TumorHigh-Throughput Nucleotide SequencingImmune Checkpoint InhibitorsMutationNeoplasmsAgedB7-H1 AntigenFemaleHumansMaleMiddle AgedPrognosisRetrospective StudiesB7-H1 AntigenBiomarkers, TumorImmune Checkpoint InhibitorsHigh-throughput nucleotide sequencingImmune checkpoint inhibitorsPD-L1SubclonalityTumor mutational burden

Identifiers

PMID40968606
PMCPMC13680077

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.