Evidence map›Paper›PMID 40964862›Full record

ArticleJournal of the American Chemical Society2025

Design of Tau Aggregation Inhibitors Using Iterative Machine Learning and a Polymorph-Specific Brain-Seeded Fibril Amplification Assay.

Alessia Santambrogio, Robert I Horne, Michael A Metrick, Nicholas C T Gallagher, Z Faidon Brotzakis, Dillon Rinauro, Ergina Vourkou, Katerina Papanikolopoulou, Efthimios M C Skoulakis, Sara Linse and 2 more

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In one paragraph

Article in Journal of the American Chemical Society, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Alessia SantambrogioCentre for Misfolding Diseases, Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, U.K.
Robert I HorneCentre for Misfolding Diseases, Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, U.K.ORCID 0000-0003-1534-2639
Michael A MetrickCentre for Misfolding Diseases, Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, U.K.
Nicholas C T GallagherCentre for Misfolding Diseases, Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, U.K.
Z Faidon BrotzakisCentre for Misfolding Diseases, Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, U.K.
Dillon RinauroCentre for Misfolding Diseases, Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, U.K.
Ergina VourkouInstitute for Fundamental Biomedical Research, Biomedical Sciences Research Centre "Alexander Fleming", Vari 16672, Greece.
Katerina PapanikolopoulouInstitute for Fundamental Biomedical Research, Biomedical Sciences Research Centre "Alexander Fleming", Vari 16672, Greece.
Efthimios M C SkoulakisInstitute for Fundamental Biomedical Research, Biomedical Sciences Research Centre "Alexander Fleming", Vari 16672, Greece.ORCID 0000-0001-5113-6192
Sara LinseBiochemistry and structural biology, Lund University, 22100 Lund, Sweden.ORCID 0000-0001-9629-7109
Byron CaugheyLaboratory of Neurological Infections and Immunity, National Institute for Allergy and Infectious Diseases, Hamilton, Montana 59840, United States.
Michele VendruscoloCentre for Misfolding Diseases, Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, U.K.ORCID 0000-0002-3616-1610

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aggregation of tau into amyloid fibrils is associated with Alzheimer's disease (AD) and related tauopathies. Since different tauopathies are characterized by the formation of distinct tau fibril morphologies, it is important to combine the search of tau aggregation inhibitors with the development of in vitro tau aggregation assays that recapitulate aggregation as it may occur in the brain. Here we address this problem by reporting an in vitro tau aggregation assay in which AD brain homogenates are used to seed the generation of first-generation tau fibrils in a polymorph-specific manner under quiescent conditions. These fibrils are then used to create amyloid seed libraries from which second-generation kinetic assays can be readily performed. Using this strategy, we illustrate an iterative machine learning method for the identification of small molecules for the polymorph-specific inhibition of the in vitro formation of tau fibrils. We further show that the small molecules selected by this procedure are potent inhibitors in a

Indexed as

AmyloidBrainDrug DesignMachine LearningProtein Aggregatestau ProteinsAlzheimer DiseaseAnimalsHumansSmall Molecule LibrariesTauopathiesAmyloidProtein AggregatesSmall Molecule Librariestau Proteins

Identifiers

PMID40964862
PMCPMC12498416

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.