Evidence map›Paper›PMID 40963218›Full record

ArticleEnvironmental science & technology2025

Polymer Length Governs DNA Adsorption Dynamics on Mineral Surfaces.

Veer Vikram Singh, Naresh Kumar, Richard L Kimber, Ákos Weiser, Ron Pinhasi, Stephan M Kraemer

Abstract read
In one paragraph

Article in Environmental science & technology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Veer Vikram SinghDepartment of Environmental Geosciences, Centre for Microbiology and Environmental Systems Science, University of Vienna, Josef-Holaubek-Platz 2, 1090 Vienna, Austria.
Naresh KumarSoil Chemistry, Wageningen University and Research, Droevendaalsesteeg 3, 6708 PB Wageningen, The Netherlands.ORCID 0000-0002-8593-5758
Richard L KimberDepartment of Earth and Environmental Sciences, The University of Manchester, M13 9PL Manchester, U.K.ORCID 0000-0003-1438-4116
Ákos WeiserDepartment of Environmental Geosciences, Centre for Microbiology and Environmental Systems Science, University of Vienna, Josef-Holaubek-Platz 2, 1090 Vienna, Austria.
Ron PinhasiDepartment of Evolutionary Anthropology, University of Vienna, Djerassiplatz 1, 1030 Vienna, Austria.
Stephan M KraemerDepartment of Environmental Geosciences, Centre for Microbiology and Environmental Systems Science, University of Vienna, Josef-Holaubek-Platz 2, 1090 Vienna, Austria.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA adsorption onto mineral surfaces plays a crucial role in controlling its biogeochemical cycling, environmental stability, and accessibility for diverse environmental DNA (eDNA) applications. While eDNA exists in a wide range of polymer lengths, a limited understanding of how DNA polymer length influences adsorption and competition on mineral surfaces hinders accurate interpretations of its mobility and persistence in natural systems. Here, we address this knowledge gap by investigating the role of DNA polymer length (99 bp to ∼20,000 bp) on interactions with selected environmentally relevant minerals, including Fe(III)-(oxyhydr)oxides (goethite, 2-line ferrihydrite), clays (kaolinite, montmorillonite) and hydroxyapatite. Controlled batch experiments at neutral pH show that adsorption from model uniform DNA solutions increases with increasing polymer length for Fe(III)-(oxyhydr)oxides and clays, with the reverse trend observed for hydroxyapatite. During competitive adsorption experiments (using 99 and 2000 bp DNA), the order of addition influenced the extent of adsorption. However, under simultaneous addition─closely reflecting natural environmental conditions, where both polymers compete for binding sites─shorter DNA polymers exhibited preferential adsorption across all minerals. We hypothesize that this preferential adsorption may contribute toward the enhanced environmental persistence of shorter DNA polymers, including the exclusive preservation of small DNA polymers (<100 bp) over long time scales. These findings underscore the critical role of polymer length in DNA adsorption and provide a basis for mechanistic insights into the factors influencing its preservation and fate in natural environments with implications for a range of DNA-based technologies.

Indexed as

DNAMineralsPolymersAdsorptionSurface PropertiesDNAMineralsPolymersaDNAcompetitive adsorptionDNA biogeochemical cyclingDNA persistenceeDNA

Identifiers

PMID40963218
PMCPMC12489982

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.