Evidence map›Paper›PMID 40961941›Full record

ReviewAmerican journal of human genetics2025

RetiGene, a comprehensive gene atlas for inherited retinal diseases.

Carlo Rivolta, Elifnaz Celik, Dhryata Kamdar, Francesca Cancellieri, Karolina Kaminska, Mukhtar Ullah, Pilar Barberán-Martínez, Manon Bouckaert, Marta Cortón, Emma Delanote and 21 more

Abstract readReview
In one paragraph

Review in American journal of human genetics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. CLUAP1 variants cause non-syndromic retinitis pigmentosa.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2026
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. The Genetic Landscape of Inherited Retinal Diseases in the Israeli Population.Investigative ophthalmology & visual science · 2026
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

31 authors.

Carlo RivoltaOphthalmic Genetics Group, Institute of Molecular and Clinical Ophthalmology Basel (IOB), Basel 4031, Switzerland; Department of Ophthalmology, University of Basel, Basel 4031, Switzerland; Department of Genetics, Genomics and Cancer Sciences, University of Leicester, Leicester LE1 7RH, UK. Electronic address: carlo.rivolta@iob.ch.
Elifnaz CelikOphthalmic Genetics Group, Institute of Molecular and Clinical Ophthalmology Basel (IOB), Basel 4031, Switzerland; Department of Ophthalmology, University of Basel, Basel 4031, Switzerland.
Dhryata KamdarOphthalmic Genetics Group, Institute of Molecular and Clinical Ophthalmology Basel (IOB), Basel 4031, Switzerland; Department of Ophthalmology, University of Basel, Basel 4031, Switzerland.
Francesca CancellieriOphthalmic Genetics Group, Institute of Molecular and Clinical Ophthalmology Basel (IOB), Basel 4031, Switzerland; Department of Ophthalmology, University of Basel, Basel 4031, Switzerland.
Karolina KaminskaOphthalmic Genetics Group, Institute of Molecular and Clinical Ophthalmology Basel (IOB), Basel 4031, Switzerland; Department of Ophthalmology, University of Basel, Basel 4031, Switzerland.
Mukhtar UllahOphthalmic Genetics Group, Institute of Molecular and Clinical Ophthalmology Basel (IOB), Basel 4031, Switzerland; Department of Ophthalmology, University of Basel, Basel 4031, Switzerland.
Pilar Barberán-MartínezMolecular, Cellular, and Genomic Biomedicine Group, IIS-La Fe, Valencia 46026, Spain; Joint Unit CIPF-IIS La Fe Molecular, Cellular and Genomic Biomedicine, IIS-La Fe, Valencia 46026, Spain.
Manon BouckaertCenter for Medical Genetics Ghent, Ghent University, Ghent 9000, Belgium; Department of Biomolecular Medicine, Ghent University, Ghent 9000, Belgium.
Marta CortónDepartment of Genetics & Genomics, Instituto de Investigación Sanitaria-Fundación Jiménez Díaz University Hospital, Universidad Autónoma de Madrid (IIS-FJD, UAM), Madrid 28040, Spain; Center for Biomedical Network Research on Rare Diseases (CIBERER), Instituto de Salud Carlos III, Madrid 28029, Spain.
Emma DelanoteCenter for Medical Genetics Ghent, Ghent University, Ghent 9000, Belgium; Department of Biomolecular Medicine, Ghent University, Ghent 9000, Belgium.
Lidia Fernández-CaballeroDepartment of Genetics & Genomics, Instituto de Investigación Sanitaria-Fundación Jiménez Díaz University Hospital, Universidad Autónoma de Madrid (IIS-FJD, UAM), Madrid 28040, Spain; Center for Biomedical Network Research on Rare Diseases (CIBERER), Instituto de Salud Carlos III, Madrid 28029, Spain.
Gema García GarcíaMolecular, Cellular, and Genomic Biomedicine Group, IIS-La Fe, Valencia 46026, Spain; Center for Biomedical Network Research on Rare Diseases (CIBERER), Instituto de Salud Carlos III, Madrid 28029, Spain.
Lara K HoltesDepartment of Human Genetics, Radboud University Medical Center, Nijmegen, 6525 GA, the Netherlands.
Marianthi KaraliDepartment of Precision Medicine, Medical Genetics, Università degli Studi della Campania "Luigi Vanvitelli", Naples 80138, Italy; Multidisciplinary Department of Medical, Surgical and Dental Sciences, Eye Clinic, Università degli Studi della Campania "Luigi Vanvitelli", Naples 80138, Italy.
Irma LopezDepartment of Paediatric Surgery, Human Genetics, and Ophthalmology, McGill Ocular Genetics Laboratory and Centre, McGill University, Montreal, QC H4A 3S5, Canada.
Virginie G PeterOphthalmic Genetics Group, Institute of Molecular and Clinical Ophthalmology Basel (IOB), Basel 4031, Switzerland; Department of Ophthalmology, Bern University Hospital, Bern 3010, Switzerland.
Nina SchneiderDepartment of Ophthalmology, Hadassah Medical Center, The Hebrew University of Jerusalem, Jerusalem 91120, Israel.
Lieselot VinckeCenter for Medical Genetics Ghent, Ghent University, Ghent 9000, Belgium; Department of Biomolecular Medicine, Ghent University, Ghent 9000, Belgium.
Carmen AyusoDepartment of Genetics & Genomics, Instituto de Investigación Sanitaria-Fundación Jiménez Díaz University Hospital, Universidad Autónoma de Madrid (IIS-FJD, UAM), Madrid 28040, Spain; Center for Biomedical Network Research on Rare Diseases (CIBERER), Instituto de Salud Carlos III, Madrid 28029, Spain.
Sandro BanfiDepartment of Precision Medicine, Medical Genetics, Università degli Studi della Campania "Luigi Vanvitelli", Naples 80138, Italy; Telethon Institute of Genetics and Medicine, Pozzuoli 80078, Italy.
Beatrice BocquetInstitute for Neurosciences of Montpellier, Université de Montpellier, Montpellier 34091, France.
Frauke CoppietersCenter for Medical Genetics Ghent, Ghent University, Ghent 9000, Belgium; Department of Biomolecular Medicine, Ghent University, Ghent 9000, Belgium; Department of Pharmaceutics, Ghent University, Ghent 9000, Belgium.
Frans P M CremersDepartment of Human Genetics, Radboud University Medical Center, Nijmegen, 6525 GA, the Netherlands.
Chris F InglehearnLeeds Institute of Medical Research, Division of Molecular Medicine, University of Leeds, Leeds LS2 9JT, UK.
Takeshi IwataDivision of Molecular and Cellular Biology, National Institute of Sensory Organs, NHO Tokyo Medical Center, Tokyo 152-8902, Japan.
Vasiliki KalatzisInstitute for Neurosciences of Montpellier, Université de Montpellier, Montpellier 34091, France.
Robert K KoenekoopDepartment of Paediatric Surgery, Human Genetics, and Ophthalmology, McGill Ocular Genetics Laboratory and Centre, McGill University, Montreal, QC H4A 3S5, Canada.
José M MillánMolecular, Cellular, and Genomic Biomedicine Group, IIS-La Fe, Valencia 46026, Spain; Center for Biomedical Network Research on Rare Diseases (CIBERER), Instituto de Salud Carlos III, Madrid 28029, Spain.
Dror SharonDepartment of Ophthalmology, Hadassah Medical Center, The Hebrew University of Jerusalem, Jerusalem 91120, Israel.
Carmel ToomesLeeds Institute of Medical Research, Division of Molecular Medicine, University of Leeds, Leeds LS2 9JT, UK.
Mathieu QuinodozOphthalmic Genetics Group, Institute of Molecular and Clinical Ophthalmology Basel (IOB), Basel 4031, Switzerland; Department of Ophthalmology, University of Basel, Basel 4031, Switzerland; Department of Genetics, Genomics and Cancer Sciences, University of Leicester, Leicester LE1 7RH, UK. Electronic address: mathieu.quinodoz@iob.ch.

Funding

NAC Attack, a phase-3, multicenter, randomized, placebo-controlled trial in patients with retinitis pigmentosaUG1EY033293 · NEI · JOHNS HOPKINS UNIVERSITY · PI Xiangrong Kong · 2022 to 2026
$18.1M
Antisense therapy for the treatment of visual loss in Usher syndromeR01EY030499 · NEI · LSU HEALTH SCIENCES CENTER · PI KOENEKOOP, ROBERT, LENTZ, JENNIFER JEAN · 2019 to 2023
$1.7M
NAC Attack, A Phase-3, Multicenter, Randomized, Placebo-Controlled Trial in Patents with Retinitis PigmentosaUG1EY033286 · NEI · JOHNS HOPKINS UNIVERSITY · PI Peter A Campochiaro · 2022 to 2026
$1.7M
NAC Attack AOSLO Reading CenterUG1EY033292 · NEI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Joseph Carroll, JACQUE LYNNE DUNCAN · 2022 to 2026
$915k
NEI NIH HHS R01 EY030499NEI NIH HHS UG1 EY033286NEI NIH HHS UG1 EY033292NEI NIH HHS UG1 EY033293
6 · The paper itself

Abstract

Inherited retinal diseases (IRDs) are rare disorders, typically presenting as Mendelian traits, that result in stationary or progressive visual impairment. They are characterized by extensive genetic heterogeneity, possibly the highest among all human genetic diseases, as well as diverse inheritance patterns. Despite advances in gene discovery, limited understanding of gene function and challenges in accurately interpreting variants continue to hinder both molecular diagnosis and genetic research in IRDs. One key problem is the absence of a comprehensive and widely accepted catalog of disease-associated genes, which would ensure consistent genetic testing and reliable molecular diagnoses. With the rapid pace of IRD gene discovery, gene catalogs require frequent validation and updates to remain clinically and scientifically useful. To address these gaps, we developed RetiGene, an expert-curated gene atlas that integrates variant data, bulk and single-cell RNA sequencing, and functional annotations. Through the integration of diverse data sources, RetiGene supports candidate gene prioritization, functional studies, and therapeutic development in IRDs.

Indexed as

Databases, GeneticRetinal DiseasesGenetic Predisposition to DiseaseHumansdatabaseinherited retinal diseasesIRD

Identifiers

PMID40961941
PMCPMC12696501

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.