Evidence map›Paper›PMID 40961135›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2025

Employing deep mutational scanning in the

Conor E McKay, Miles Deans, Jack Connor, Janet C Saunders, Christopher Lloyd, Sheena E Radford, David J Brockwell

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Dosa: A method to covalently barcode proteins for high-throughput biochemistry.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Employing deep mutational scanning in theProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Conor E McKayAstbury Centre for Structural and Molecular Biology, University of Leeds, Leeds LS2 9JT, United Kingdom.ORCID 0009-0001-7357-5441
Miles DeansAstbury Centre for Structural and Molecular Biology, University of Leeds, Leeds LS2 9JT, United Kingdom.
Jack ConnorAstbury Centre for Structural and Molecular Biology, University of Leeds, Leeds LS2 9JT, United Kingdom.
Janet C SaundersThe Discovery Centre, AstraZeneca, Cambridge CB2 0AA, United Kingdom.
Christopher LloydThe Discovery Centre, AstraZeneca, Cambridge CB2 0AA, United Kingdom.
Sheena E RadfordAstbury Centre for Structural and Molecular Biology, University of Leeds, Leeds LS2 9JT, United Kingdom.
David J BrockwellAstbury Centre for Structural and Molecular Biology, University of Leeds, Leeds LS2 9JT, United Kingdom.ORCID 0000-0002-0802-5937

Funding

Royal Society (The Royal Society) RSRP/R1/211057UKRI | Biotechnology and Biological Sciences Research Council (BBSRC) BB/T007222/1UKRI | Biotechnology and Biological Sciences Research Council (BBSRC) BB/W510403/1Wellcome TrustWellcome Trust (WT) 104918MA
6 · The paper itself

Abstract

Deep mutational scanning (DMS) assays provide a powerful method to generate large-scale datasets essential for advancing AI-driven predictions in biology. The tripartite β-lactamase assay (TPBLA), in which a protein of interest is inserted between two domains of β-lactamase, has previously been reported as capable of detecting and quantitating the aggregation of proteins and biologics in the oxidizing periplasm of

Indexed as

AmyloidAmyloid beta-PeptidesEscherichia coliPeriplasmAlzheimer Diseasebeta-LactamasesHumansMutationPeptide FragmentsThermodynamicsAmyloidAmyloid beta-Peptidesamyloid beta-protein (1-42)beta-LactamasesPeptide FragmentsamyloidAβ42deep mutational scanningmachine learning

Identifiers

PMID40961135
PMCPMC12478104

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.