Evidence map›Paper›PMID 40961039›Full record

ArticlePloS one2025

The GravyTrain toolbox for molecular cell biology.

Oren Shatz, Zvulun Elazar

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Oren ShatzDepartment of Biomolecular Sciences, The Weizmann Institute of Science, Rehovot, Israel.
Zvulun ElazarDepartment of Biomolecular Sciences, The Weizmann Institute of Science, Rehovot, Israel.ORCID 0000-0002-3231-4464

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Yeast genetics has the power for thorough investigation of complex systems in molecular cell biology. Here, we present GravyTrain, a comprehensive repository of constructs for genomic modifications, including gene deletions or tagging with fusion tags for robust protein characterization and manipulation. The modular cloning scheme employed by GravyTrain allows shuffling of elements between constructs and potentially the application of included protein tags to research beyond yeast. The experimental potential of GravyTrain is demonstrated by the de novo construction of a library of strains for studying autophagy in yeast.

Indexed as

Molecular BiologySaccharomyces cerevisiaeAutophagyCloning, MolecularGene Library

Identifiers

PMID40961039
PMCPMC12443241

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.