Evidence map›Paper›PMID 40960132›Full record

ArticleACS chemical biology2025

Characterization of Variation in Natural Product Production Under Chemical Elicitation Using Parallel Stable Isotope Labeling.

Liana Zaroubi, Bruno S Paulo, Ethan Fung, Hannah Cavanagh, Robert Britton, Alessandra S Eustaquio, Roger G Linington

Abstract read
In one paragraph

Article in ACS chemical biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
  3. Identification of Deoxy- andJournal of natural products · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Liana ZaroubiDepartment of Chemistry, Simon Fraser University, Burnaby, BC V5A 1S6, Canada.
Bruno S PauloDepartment of Pharmaceutical Sciences, Retzky College of Pharmacy, University of Illinois at Chicago, Chicago, Illinois 60607, United States.
Ethan FungDepartment of Chemistry, Simon Fraser University, Burnaby, BC V5A 1S6, Canada.
Hannah CavanaghDepartment of Chemistry, Simon Fraser University, Burnaby, BC V5A 1S6, Canada.
Robert BrittonDepartment of Chemistry, Simon Fraser University, Burnaby, BC V5A 1S6, Canada.ORCID 0000-0002-9335-0047
Alessandra S EustaquioDepartment of Pharmaceutical Sciences, Retzky College of Pharmacy, University of Illinois at Chicago, Chicago, Illinois 60607, United States.ORCID 0000-0002-7852-7844
Roger G LiningtonDepartment of Chemistry, Simon Fraser University, Burnaby, BC V5A 1S6, Canada.ORCID 0000-0003-1818-4971

Funding

Development of a Bacterial Host for Natural Product Discovery and ProductionR01GM129344 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI EUSTAQUIO, ALESSANDRA S · 2020 to 2023
$1.5M
NIGMS NIH HHS R01 GM129344
6 · The paper itself

Abstract

Most microorganisms produce far fewer secondary metabolites under laboratory culture conditions than would be expected based on the number of biosynthetic gene clusters (BGCs) present in their genomes. One strategy for inducing secondary metabolite production is to add chemical elicitors that disrupt bacterial metabolism. This one-strain-many-compounds (OSMAC) strategy has been used successfully to discover a broad range of natural products. However, traditional strategies for detecting changes in natural product production are not well suited to characterizing variations in the full secondary metabolome under elicitation conditions. One efficient tool to differentiate metabolites between experiments is IsoAnalyst, a parallel stable isotope labeling method that connects secondary metabolites to BGCs by determining the rates of incorporation for a set of isotopically labeled secondary metabolism building blocks. In this study three strains of

Indexed as

Biological ProductsIsotope LabelingMultigene FamilySecondary MetabolismBiological Products

Identifiers

PMID40960132
PMCPMC12684010

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.