Evidence map›Paper›PMID 40956701›Full record

ArticleeLife2025

Prophage regulation of

Ojas Natarajan, Susanne L Gibboney, Morgan N Young, Shen Jean Lim, Felicia Nguyen, Natalia Pluta, Celine G F Atkinson, Assunta Liberti, Eric D Kees, Brittany A Leigh and 3 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in eLife, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Redefinition of the toll-like receptor repertoire inFrontiers in cellular and infection microbiology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Ojas NatarajanDepartment of Pediatrics, Morsani College of Medicine, University of South Florida, Tampa, United States.ORCID https://orcid.org/0000-0001-7887-2640
Susanne L GibboneyDepartment of Pediatrics, Morsani College of Medicine, University of South Florida, Tampa, United States.
Morgan N YoungDepartment of Pediatrics, Morsani College of Medicine, University of South Florida, Tampa, United States.
Shen Jean LimCollege of Marine Science, University of South Florida, Tampa, United States.
Felicia NguyenBiomedical Sciences Program, University of South Florida, Tampa, United States.
Natalia PlutaBiomedical Sciences Program, University of South Florida, Tampa, United States.
Celine G F AtkinsonDepartment of Cell Biology, Microbiology, and Molecular Biology, University of South Florida, Tampa, United States.
Assunta LibertiDepartment of Pediatrics, Morsani College of Medicine, University of South Florida, Tampa, United States.
Eric D KeesBioTechnology Institute, University of Minnesota, St. Paul, United States.
Brittany A LeighDepartment of Pediatrics, Morsani College of Medicine, University of South Florida, Tampa, United States.
Mya BreitbartCollege of Marine Science, University of South Florida, Tampa, United States.
Jeffrey A GralnickBioTechnology Institute, University of Minnesota, St. Paul, United States.ORCID https://orcid.org/0000-0001-9250-7770
Larry J DishawDepartment of Pediatrics, Morsani College of Medicine, University of South Florida, Tampa, United States.ORCID https://orcid.org/0000-0002-2705-4573

Funding

National Science Foundation Graduate Research Fellowship ProgramNational Science Foundation IOS-1456301National Science Foundation MCB-1817308National Science Foundation NSF IOS-2226050/51
6 · The paper itself

Abstract

Lysogens, bacteria with one or more viruses (prophages) integrated into their genomes, are abundant in the gut of animals. Prophages often influence bacterial traits; however, the influence of prophages on the gut microbiota-host immune axis in animals remains poorly understood. Here, we investigate the influence of the prophage SfPat on

Indexed as

BiofilmsCionaGastrointestinal MicrobiomeProphagesShewanellaAnimalsCiona robustaciona robusta (c. intestinalis type a)gut microbiomeinfectious diseaseinnate immunitymicrobiologyprophageShewanella fidelis 3313tunicateVCBP-C

Identifiers

PMID40956701
PMCPMC12440353

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.