Evidence map›Paper›PMID 40956002›Full record

ArticlePigment cell & melanoma research2025

Germline Cancer Susceptibility Variants in Patients With Uveal Melanoma.

Pauliina E Repo, Eveliina Jakkula, Juho Hiltunen, Heidi Putkuri, Aleksandra Staskiewicz-Tuikkanen, Reetta-Stiina Järvinen, Martin Täll, Virpi Raivio, Rana'a T Al-Jamal, Tero T Kivelä and 1 more

Abstract read
In one paragraph

Article in Pigment cell & melanoma research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Pauliina E RepoEye Genetics Group, Folkhälsan Research Center, Helsinki, Finland.ORCID 0000-0002-9257-9376
Eveliina JakkulaDepartment of Clinical Genetics, University of Helsinki and Helsinki University Hospital, Helsinki, Finland.
Juho HiltunenEye Genetics Group, Folkhälsan Research Center, Helsinki, Finland.
Heidi PutkuriEye Genetics Group, Folkhälsan Research Center, Helsinki, Finland.
Aleksandra Staskiewicz-TuikkanenEye Genetics Group, Folkhälsan Research Center, Helsinki, Finland.
Reetta-Stiina JärvinenEye Genetics Group, Folkhälsan Research Center, Helsinki, Finland.
Martin TällOcular Oncology Service, Department of Ophthalmology, University of Helsinki and Helsinki University Hospital, Helsinki, Finland.
Virpi RaivioOcular Oncology Service, Department of Ophthalmology, University of Helsinki and Helsinki University Hospital, Helsinki, Finland.
Rana'a T Al-JamalOcular Oncology Service, Department of Ophthalmology, University of Helsinki and Helsinki University Hospital, Helsinki, Finland.
Tero T KiveläOcular Oncology Service, Department of Ophthalmology, University of Helsinki and Helsinki University Hospital, Helsinki, Finland.
Joni A TurunenEye Genetics Group, Folkhälsan Research Center, Helsinki, Finland.ORCID 0000-0002-9569-9146

Funding

Evald ja Hilda Nissin SäätiöMary och Georg C. Ehrnrooths StiftelseSilmä- ja kudospankkisäätiöSilmäsäätiöSyöpäsäätiöthe Government's research fund TYH2023312the Government's research fund TYH2023338
6 · The paper itself

Abstract

Some patients with uveal melanoma (UM) show genetic cancer predisposition: ~2% harbor a pathogenic or likely pathogenic (P/LP) germline variant in BAP1 or, rarely, in 20 other cancer-associated genes. Up to 75% of patients with familial UM (FUM) lack genetic diagnosis, prompting a search beyond BAP1. We studied with exome sequencing blood samples from 106 patients with UM and higher-than-average risk of cancer (UM ≤ 45 years of age, bilateral or familial UM, or personal history of non-ocular cancer) and no P/LP variants in BAP1. Sixteen (15%; 95% confidence interval [CI] 9-23) patients carried at least one P/LP variant in dominant cancer genes (CHEK2, DDX41, FANCM, HOXB13, RAD50, SDHA, SDHB) and fifteen in recessive ones. Only CHEK2 and FANCM have previously been reported in patients with UM. Six patients (6%; 95% CI 2-12) carried multilocus P/LP variants. Their median age at diagnosis of UM was 51 (range, 22-69) years, 9 years less than the cohort median of 60 (range, 13-89). This suggests a role for co-occurring pathogenic variants and potentially multilocus inherited neoplasia allele syndrome (MINAS) in UM predisposition. None with FUM carried P/LP variants, warranting investigation of further genes, lower penetrance variants, and multi-gene heterozygosity in UM predisposition.

Indexed as

Genetic Predisposition to DiseaseGerm-Line MutationMelanomaUveal NeoplasmsAdolescentAdultAgedAged, 80 and overFemaleHumansMaleMiddle AgedTumor Suppressor ProteinsUbiquitin ThiolesteraseUveal MelanomaYoung AdultBAP1 protein, humanTumor Suppressor ProteinsUbiquitin ThiolesteraseBAP1cancer predispositioncancer syndromedouble heterozygosityMINASmulti‐locusuveal melanoma

Identifiers

PMID40956002
PMCPMC12334930

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.