Evidence map›Paper›PMID 40954998›Full record

ArticleBiophysical journal2025

Annotating the x-ray diffraction pattern of vertebrate striated muscle.

Natalia A Koubassova, Debabrata Dutta, Weikang Ma, Andrey K Tsaturyan, Thomas Irving, Raúl Padrón, Roger Craig

Abstract read
In one paragraph

Article in Biophysical journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Muscle Diffraction at the Life Science X-ray Scattering Beamline.bioRxiv : the preprint server for biology · 2026
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Natalia A KoubassovaInstitute of Mechanics, Lomonosov Moscow State University, Moscow, Russia.
Debabrata DuttaDivision of Cell Biology and Imaging, Department of Radiology, University of Massachusetts Chan Medical School, Worcester, Massachusetts.
Weikang MaDepartment of Biology, Illinois Institute of Technology, Chicago, Illinois.
Andrey K TsaturyanDepartment of Physiology and Pharmacology, Tel Aviv University, Tel Aviv, Israel.
Thomas IrvingDepartment of Biology, Illinois Institute of Technology, Chicago, Illinois.
Raúl PadrónDivision of Cell Biology and Imaging, Department of Radiology, University of Massachusetts Chan Medical School, Worcester, Massachusetts.
Roger CraigDivision of Cell Biology and Imaging, Department of Radiology, University of Massachusetts Chan Medical School, Worcester, Massachusetts. Electronic address: roger.craig@umassmed.edu.

Funding

Training and OutreachP30GM124166 · NIGMS · CORNELL UNIVERSITY · PI RICHARD A. CERIONE · 2019 to 2026
$28.3M
The Biophysics Collaborative Access Team (User Training and Outreach)P30GM138395 · NIGMS · ILLINOIS INSTITUTE OF TECHNOLOGY · PI THOMAS C IRVING · 2021 to 2026
$16.5M
ChimeraX -- Next Generation Visualization and Analysis Software for Multiscale ModelingR01GM129325 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2018 to 2025
$5.2M
Structural basis of the super-relaxed state in human cardiac muscleR01HL164560 · NHLBI · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI PADRON, RAUL · 2022 to 2025
$2.8M
Mechanism of regulation of cardiac contraction by phosphorylation of myosin binding protein CR01HL139883 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI CRAIG, ROGER W, RALPHE, JOHN CARTER · 2018 to 2021
$2.7M
Dissecting the structural origin of relaxation in skeletal muscleR01AR081941 · NIAMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI Raul Padron · 2023 to 2026
$2.2M
Structure of The Interacting-Heads Motif in Myosin Filaments and MoleculesR01AR072036 · NIAMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI CRAIG, ROGER W · 2017 to 2021
$2.1M
NHLBI NIH HHS R01 HL139883NHLBI NIH HHS R01 HL164560NIAMS NIH HHS R01 AR072036NIAMS NIH HHS R01 AR081941NIGMS NIH HHS P30 GM124166NIGMS NIH HHS P30 GM138395NIGMS NIH HHS R01 GM129325
6 · The paper itself

Abstract

Low-angle x-ray diffraction is a powerful technique for analyzing the molecular structure of the myofilaments of striated muscle in situ. It has contributed greatly to our understanding of the relaxed, 430-Å repeating organization of myosin heads in thick filaments in skeletal and cardiac muscle. Using x-ray diffraction, changes in filament structure can be detected on the angstrom length scale and millisecond timescale, leading to models that are the foundation of our understanding of the structural basis of contraction. As with all x-ray fiber diffraction studies, interpretation requires modeling, which has previously been based on low-resolution knowledge of thick filament structure and is complicated by the contributions of multiple filament components to most x-ray reflections. Here, we use an atomic model of the human cardiac thick filament C-zone, derived from cryo-EM in the presence of the myosin inhibitor, mavacamten, to compute objectively the contributions of myosin heads, tails, titin, and cMyBP-C to the diffraction pattern, by including/excluding these components in the calculations. Our results support some previous interpretations but contradict others. We confirm that the myosin heads are responsible for most of the intensity on the myosin layer lines, including the M3 meridional. Contrary to expectation, we find that myosin tails contribute little to the pattern, including the M6 meridional; this reflection arises mainly from heads and other components. The M11 layer line (39-Å spacing) arises mostly from the curved and kinked structure of titin, which allows 11 ∼42-Å-long domains to fit into the 430-Å repeat. The M11 spacing can be used as a measure of strain in the myosin filament backbone as there is negligible head contribution. The computed layer lines account well for the experimentally determined pattern. These insights should aid future understanding of the x-ray pattern of intact muscle in different conditions such as contraction and drug treatment.

Indexed as

Muscle, StriatedX-Ray DiffractionAnimalsConnectinHumansModels, MolecularMyosinsConnectinMyosins

Identifiers

PMID40954998
PMCPMC12694897

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.