Evidence map›Paper›PMID 40954373›Full record

ArticleFolia microbiologica2025

Comparison of Viral RNA Extraction Protocols for Senecavirus A and Classical Swine Fever Virus.

Antônio Augusto Fonseca Júnior, Mateus Laguardia-Nascimento, Aline Aparecida Silva Barbosa, Valdenia Lopes da Silva Gonçalves, Carla do Amaral Pinto, Tânia Rosária Pereira Freitas, Anselmo Vasconcelos Rivetti Júnior, Marcelo Fernandes Camargos

Abstract read
PubMed Publisher
In one paragraph

Article in Folia microbiologica, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Antônio Augusto Fonseca JúniorLaboratório Federal de Defesa Agropecuária de Minas Gerais, Pedro Leopoldo, Brazil. antonio.fonseca@agro.gov.br.ORCID http://orcid.org/0000-0002-2962-5616
Mateus Laguardia-NascimentoLaboratório Federal de Defesa Agropecuária de Minas Gerais, Pedro Leopoldo, Brazil.
Aline Aparecida Silva BarbosaLaboratório Federal de Defesa Agropecuária de Minas Gerais, Pedro Leopoldo, Brazil.
Valdenia Lopes da Silva GonçalvesLaboratório Federal de Defesa Agropecuária de Minas Gerais, Pedro Leopoldo, Brazil.
Carla do Amaral PintoLaboratório Federal de Defesa Agropecuária de Minas Gerais, Pedro Leopoldo, Brazil.
Tânia Rosária Pereira FreitasLaboratório Federal de Defesa Agropecuária de Minas Gerais, Pedro Leopoldo, Brazil.
Anselmo Vasconcelos Rivetti JúniorLaboratório Federal de Defesa Agropecuária de Minas Gerais, Pedro Leopoldo, Brazil.
Marcelo Fernandes CamargosLaboratório Federal de Defesa Agropecuária de Minas Gerais, Pedro Leopoldo, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study evaluated four commercial viral RNA extraction protocols using samples inactivated with TRIzol®, aiming to detect Senecavirus A (SV-A) and Classical Swine Fever Virus (CSFV). The tested kits were: RNeasy® (Qiagen), IndiSpin (Indical), Aurum (BioRad), and Direct-zol (Zymo), which were compared to the traditional method with Tri Reagent (Sigma). The analyses were based on the sensitivity and speed of extractions in a routine laboratory setting. The results showed that adaptations in the protocols can increase detection sensitivity. Clinical samples were processed using different protocol variations, with RNeasy® demonstrating notable performance, including samples collected using GenoTube®, which suggests its viability for field molecular diagnosis. The study concludes that, although TRIzol® is effective, alternative methods offer practicality, shorter extraction time, and equivalent or superior sensitivity, especially in clinical samples.

Indexed as

Classical Swine Fever VirusRNA extractionSenecavirus a

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.