Evidence map›Paper›PMID 40954370›Full record

ArticleNature structural & molecular biology2025

Activation of Arp2/3 complex by a SPIN90 dimer in linear actin-filament nucleation.

Justus Francis, Achyutha Krishna Pathri, Kankipati Teja Shyam, Sridhar Sripada, Rishav Mitra, Heidy Y Narvaez-Ortiz, Kiran Vyshnav Eliyan, Brad J Nolen, Saikat Chowdhury

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Justus FrancisCSIR-Centre for Cellular and Molecular Biology, Hyderabad, India.ORCID http://orcid.org/0000-0003-4543-1173
Achyutha Krishna PathriCSIR-Centre for Cellular and Molecular Biology, Hyderabad, India.ORCID http://orcid.org/0000-0003-3216-1135
Kankipati Teja ShyamCSIR-Centre for Cellular and Molecular Biology, Hyderabad, India.ORCID http://orcid.org/0009-0007-5817-4483
Sridhar SripadaCSIR-Centre for Cellular and Molecular Biology, Hyderabad, India.ORCID http://orcid.org/0009-0005-2535-2218
Rishav MitraCSIR-Centre for Cellular and Molecular Biology, Hyderabad, India.
Heidy Y Narvaez-OrtizInstitute of Molecular Biology and Department of Chemistry and Biochemistry, University of Oregon, Eugene, OR, USA.ORCID http://orcid.org/0000-0002-6434-6292
Kiran Vyshnav EliyanCSIR-Centre for Cellular and Molecular Biology, Hyderabad, India.ORCID http://orcid.org/0009-0009-4855-4567
Brad J NolenInstitute of Molecular Biology and Department of Chemistry and Biochemistry, University of Oregon, Eugene, OR, USA. bnolen@uoregon.edu.ORCID http://orcid.org/0000-0002-0224-9980
Saikat ChowdhuryCSIR-Centre for Cellular and Molecular Biology, Hyderabad, India. saikat@csirccmb.org.ORCID http://orcid.org/0000-0001-8043-5028

Funding

Control of actin filament networks by Arp2/3 complex and its regulatorsR35GM136319 · NIGMS · UNIVERSITY OF OREGON · PI Bradley J Nolen · 2020 to 2026
$4.4M
NIGMS NIH HHS R35 GM136319
6 · The paper itself

Abstract

Arp2/3 complex is a key nucleator of actin filaments. It requires activation by nucleation-promoting factors (NPFs). WISH/DIP1/SPIN90 (WDS) proteins represent a unique class of NPFs that activate the Arp2/3 complex independently of preexisting filaments, promoting linear actin-filament nucleation. In fission yeast, Dip1 binds to the clamp subunits in Arp2/3 complex to induce the short-pitch conformation, where Arp2 moves closer to Arp3 to mimic a filamentous actin dimer. However, how WDS proteins stimulate subunit flattening in Arp subunits, a 'scissor-like' conformational change akin to what is observed in an actin monomer during filament formation, remained unclear. Here we present cryo-electron microscopy structures of human SPIN90 bound to activated bovine Arp2/3 complex on an actin filament pointed end. The structures show that SPIN90 dimerizes through a metazoan-specific domain in the middle segment, engaging both the clamp and the Arp3/ARPC3 interface, to drive the activating conformational changes in Arp2/3 complex. Remarkably, a single SPIN90 dimer can also bridge two Arp2/3 complexes, enabling bidirectional actin nucleation and suggesting a mechanism for rapidly assembling complex actin network architectures.

Indexed as

Actin CytoskeletonActin-Related Protein 2-3 ComplexAdaptor Proteins, Signal TransducingMuscle ProteinsActin Capping ProteinsAnimalsCattleChickensCryoelectron MicroscopyHumansMiceModels, MolecularProtein BindingProtein DomainsProtein MultimerizationRecombinant ProteinsActin Capping ProteinsActin-Related Protein 2-3 ComplexAdaptor Proteins, Signal TransducingMuscle ProteinsNCKIPSD protein, humanRecombinant Proteins

Identifiers

PMID40954370
PMCPMC12998210

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.