Evidence map›Paper›PMID 40953838›Full record

ArticleCancer reports (Hoboken, N.J.)2025

4-Phenylbutyric Acid Reduces the Proliferation in Colon Cancer Cell Lines Through Modulating the Cell Cycle Regulatory Genes: An In Silico and In Vitro Approach.

Dikshita Deka, Alakesh Das, Nabajyoti Baildya, Shruthi Nagainallur Ravichandran, Surajit Pathak, Antara Banerjee, Asim K Duttaroy

Abstract read
In one paragraph

Article in Cancer reports (Hoboken, N.J.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Dikshita DekaFaculty of Allied Health Sciences, Chettinad Academy of Research and Education (CARE), Chettinad Hospital and Research Institute (CHRI), Chennai, India.
Alakesh DasFaculty of Allied Health Sciences, Chettinad Academy of Research and Education (CARE), Chettinad Hospital and Research Institute (CHRI), Chennai, India.
Nabajyoti BaildyaDepartment of Chemistry, Milki High School, Milki, India.
Shruthi Nagainallur RavichandranFaculty of Allied Health Sciences, Chettinad Academy of Research and Education (CARE), Chettinad Hospital and Research Institute (CHRI), Chennai, India.
Surajit PathakFaculty of Allied Health Sciences, Chettinad Academy of Research and Education (CARE), Chettinad Hospital and Research Institute (CHRI), Chennai, India.
Antara BanerjeeFaculty of Allied Health Sciences, Chettinad Academy of Research and Education (CARE), Chettinad Hospital and Research Institute (CHRI), Chennai, India.ORCID 0000-0002-5519-6878
Asim K DuttaroyDepartment of Nutrition, Institute of Basic Medical Sciences, Faculty of Medicine, University of Oslo, Oslo, Norway.ORCID 0000-0003-1619-3778

Funding

DST-INSPIRE, Government of India DST/INSPIRE Fellowship/2019/IF190963
6 · The paper itself

Abstract

backgroundEndoplasmic reticulum stress (ER-stress) is recognized to have a major role in both the onset and progression of various diseases, including cancer. Therefore, much research has focused on developing chemical chaperones or small compounds to reduce ER-stress in various disease conditions.

aimThe present study investigates the effects of 4-phenylbutyric acid (4-PBA) on the modulation of proliferation and inflammatory responses in colon cancer cell lines by possibly regulating ER-stress-related protein expression. MATERIALS: Molecular docking and molecular dynamics simulations were performed to determine the binding affinity of 4-PBA with ER-stress-regulating proteins (IRE1-α, PDI, GRP78, PERK, NRF2). To validate our hypothesis, the expression levels for ER-stress-regulating genes (GRP78, XBP1, ATF6, PDI, PERK), pro-inflammatory genes (CXCL12, MCP1, COX2, CCR5), and the cell-cycle regulatory genes (CDK6, CCND1), as well as the inflammatory proteins (IL-6, IFN-γ, and CXCL10) expression and level of catalase and ROS, were studied in colon cancer cell lines before and after treatment of different concentrations of 4-PBA.

resultsIn silico analysis showed that 4-PBA could bind with IRE1-α and PERK ER-stress proteins strongly, with the binding energy of -6.8 and -6.5 Kcal/mol. Treatment with 4-PBA showed downregulation of pro-inflammatory genes, along with the ER-stress and cell-cycle regulatory genes. The reduced expression of pro-inflammatory proteins along with ROS and subsequent elevation in catalase levels by 4-PBA in colon cancer cell lines indicates a correlation between ER-stress and inflammatory response.

conclusionThe study revealed that 4-PBA has anti-inflammatory and anticarcinogenic properties, providing new avenues for future research.

Indexed as

Cell ProliferationColonic NeoplasmsEndoplasmic Reticulum StressPhenylbutyratesCell Line, TumorEndoplasmic Reticulum Chaperone BiPGene Expression Regulation, NeoplasticHumansMolecular Docking SimulationMolecular Dynamics Simulation4-phenylbutyric acidEndoplasmic Reticulum Chaperone BiPHSPA5 protein, humanPhenylbutyrates4‐phenylbutyric aciddockingER‐stressintestinal inflammationmolecular dynamics simulationunfolded protein responses

Identifiers

PMID40953838
PMCPMC12435982

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.