Evidence map›Paper›PMID 40953075›Full record

ArticlePLoS biology2025

A BRC1-modulated switch in auxin efflux accounts for the competition between Arabidopsis axillary buds.

Zoe Nahas, Anthony John Bridgen, Torkel E Loman, Jean Dillon, Katie Abley, Dora L Cano-Ramirez, Fabrizio Ticchiarelli, Madeleine Seale, James C W Locke, Ottoline Leyser

Abstract read
In one paragraph

Article in PLoS biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Zoe NahasSainsbury Laboratory, University of Cambridge, Cambridge, United Kingdom.ORCID 0000-0003-3447-5357
Anthony John BridgenSainsbury Laboratory, University of Cambridge, Cambridge, United Kingdom.
Torkel E LomanSainsbury Laboratory, University of Cambridge, Cambridge, United Kingdom.
Jean DillonSainsbury Laboratory, University of Cambridge, Cambridge, United Kingdom.
Katie AbleySainsbury Laboratory, University of Cambridge, Cambridge, United Kingdom.
Dora L Cano-RamirezSainsbury Laboratory, University of Cambridge, Cambridge, United Kingdom.
Fabrizio TicchiarelliSainsbury Laboratory, University of Cambridge, Cambridge, United Kingdom.
Madeleine SealeSainsbury Laboratory, University of Cambridge, Cambridge, United Kingdom.
James C W LockeSainsbury Laboratory, University of Cambridge, Cambridge, United Kingdom.ORCID 0000-0003-0670-1943
Ottoline LeyserSainsbury Laboratory, University of Cambridge, Cambridge, United Kingdom.

Funding

Biotechnology and Biological Sciences Research Council BB/V006088/1Biotechnology and Biological Sciences Research Council BB/X020126/1
6 · The paper itself

Abstract

As part of their modular development, plants continuously adapt their shoot branching architecture according to environmental conditions. This occurs by regulating the activity of axillary buds established in each leaf axil. Whether a bud grows into a shoot depends partly on the presence of other active shoots, which can inhibit bud activation. This systemic coordination is proposed to be mediated by the transport network of the plant hormone auxin, with buds competing to establish sustained transport of auxin, termed canalized auxin transport, into the main stem. A second hormone, strigolactone, tunes this competition by influencing the removal of the PIN1 auxin export protein from the plasma membrane, and hence the dynamics of canalization. Strigolactone also regulates the expression of another key regulatory hub, the bud-expressed transcription factor BRANCHED1 (BRC1). The interplay between auxin transport and BRC1 in regulating bud activity is poorly understood. Here, we investigate this interplay in the context of competition between buds, using Arabidopsis explants with two axillary buds as a minimal system. Using experimental data, we develop a mathematical model of bud-bud competition in which BRC1 influences the establishment of canalized auxin transport by regulating the basal rate of auxin efflux in buds. We identify single model parameters that plausibly correspond to the dual impact of strigolactone on BRC1 expression and PIN1. We show that modulating these two parameters reproduces the dynamics of bud growth and bud-bud competition observed in relevant mutants and treatments. Our model produces testable hypotheses, which we validate by generating a chimeric PIN1 auxin transporter with impaired strigolactone sensitivity, helping us uncouple the effects of strigolactone on PIN1 and BRC1. These results support the hypothesis that BRC1 influences local bud competitiveness by downregulating the basal rate of auxin efflux in buds. Together with the systemic feedbacks in the auxin transport network, this enables plants to adjust dynamically the number and location of growing branches.

Indexed as

ArabidopsisArabidopsis ProteinsIndoleacetic AcidsTranscription FactorsBiological TransportGene Expression Regulation, PlantHeterocyclic Compounds, 3-RingLactonesMembrane Transport ProteinsPlant Growth RegulatorsPlant ShootsArabidopsis ProteinsBRC1 protein, ArabidopsisHeterocyclic Compounds, 3-RingIndoleacetic AcidsLactonesMembrane Transport ProteinsPIN1 protein, ArabidopsisPlant Growth RegulatorsTranscription Factors

Identifiers

PMID40953075
PMCPMC12456834

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.