Evidence map›Paper›PMID 40950038›Full record

ArticlebioRxiv : the preprint server for biology2025

Structural basis for the function of long noncoding RNA

Parna Saha, Shivali Patel, Rafael Ca Tavares, Hyeonseok Choi, Rebecca E Andersen, Lucille H Tsao, Anna Marie Pyle, Daniel A Lim

Abstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Parna SahaDepartment of Neurological Surgery; University of California, San Francisco, San Francisco, CA 94143, USA.ORCID 0000-0001-9219-5017
Shivali PatelDepartment of Molecular Biophysics and Biochemistry Yale University, New Haven, CT, USA.ORCID 0000-0003-2480-7274
Rafael Ca TavaresDepartment of Chemistry, Yale University, New Haven, CT, USA.ORCID 0000-0003-0278-1528
Hyeonseok ChoiDepartment of Neurological Surgery; University of California, San Francisco, San Francisco, CA 94143, USA.ORCID 0009-0004-3327-3627
Rebecca E AndersenDepartment of Neurological Surgery; University of California, San Francisco, San Francisco, CA 94143, USA.ORCID 0000-0002-0702-3120
Lucille H TsaoDepartment of Chemistry, Yale University, New Haven, CT, USA.ORCID 0000-0003-4228-8332
Anna Marie PyleDepartment of Chemistry, Yale University, New Haven, CT, USA.ORCID 0000-0001-9045-8872
Daniel A LimDepartment of Neurological Surgery; University of California, San Francisco, San Francisco, CA 94143, USA.ORCID 0000-0001-7221-3425

Funding

Skill Development for Diverse Scientific Careers: A New Course Predoctoral Program in Cellular and Molecular BiologyT32GM007223 · NIGMS · YALE UNIVERSITY · PI BASERGA, SUSAN J · 1985 to 2019
$31.0M
Functional long noncoding RNAs in neural developmentR01NS124881 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI DANIEL A LIM · 2022 to 2026
$3.0M
Long noncoding RNA regulation of neural stem cellsR01NS091544 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LIM, DANIEL A · 2016 to 2020
$1.7M
BLRD VA I01 BX000252NIGMS NIH HHS T32 GM007223NINDS NIH HHS R01 NS091544NINDS NIH HHS R01 NS124881
6 · The paper itself

Abstract

LncRNA

Indexed as

LNA-ASOslncRNA PnkylncRNA structure-function studiesneuronal differentiationprimary neural stem cellsSHAPE-MaPterbium sequencing

Identifiers

PMID40950038
PMCPMC12424948

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.