Evidence map›Paper›PMID 40939636›Full record

ArticleJournal of proteome research2025

Real-Time Instrument Control across Multiple Orbitrap Platforms through a Single Software Interface.

Michael R Hoopmann, Christopher D McGann, Jesse D Canterbury, Priska D von Haller, Devin K Schweppe

Abstract read
In one paragraph

Article in Journal of proteome research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Michael R HoopmannDepartment of Genome Sciences, University of Washington, Seattle, Washington 98195, United States.ORCID 0000-0001-7029-7792
Christopher D McGannDepartment of Genome Sciences, University of Washington, Seattle, Washington 98195, United States.
Jesse D CanterburyThermo Fisher Scientific, 355 River Oaks Parkway, San Jose, California 95134, United States.
Priska D von HallerUniversity of Washington Proteomics Resource, Seattle, Washington 98195, United States.
Devin K SchweppeDepartment of Genome Sciences, University of Washington, Seattle, Washington 98195, United States.ORCID 0000-0002-3241-6276

Funding

Technology for evaluating drug-binding responses to small-molecule perturbationR35GM150919 · NIGMS · UNIVERSITY OF WASHINGTON · PI Devin Karl Schweppe · 2023 to 2026
$1.6M
NIGMS NIH HHS R35 GM150919
6 · The paper itself

Abstract

Applications using real-time spectral analysis and real-time instrument control have emerged in recent years as powerful tools to improve the capabilities and sensitivity of mass spectrometers. Software resources, such as the Instrument Application Programming Interface (IAPI) provided by Thermo Fisher Scientific, enable researchers to develop customized and powerful new real-time analysis and instrument control applications. The IAPI is segregated by instrument architecture, and therefore real-time applications developed for the Exploris instrument platform will not operate on the Tribrid instrument platform. We present Helios, a unified API that wraps IAPI for the Exploris and Tribrid series of instruments into a single interface with syntax synonymous to the IAPI. Helios automatically resolves differences in metadata provided by real-time data streams from either platform, and we illustrate how to send a customized instrument control command capable of operating on both Exploris and Tribrid instrument platforms. We provide two example applications that operate the same on both Exploris and Tribrid instruments from a single code base, eliminating the need to fork source trees and develop applications separately for each platform. The Helios API simplifies the development of real-time instrument control applications, while also increasing the number of instruments supported by those applications.

Indexed as

Mass SpectrometryProteomicsSoftwareUser-Computer Interfacereal-time mass spectrometry application programming interface C# software

Identifiers

PMID40939636
PMCPMC13220769

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.