Evidence map›Paper›PMID 40935833›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2025

Genome-wide association analysis highlights genomic regions and genes potentially associated with anestrus in crossbred gilts.

Monike Willemin Quirino, Cleverson Hebbel, Adriana Mércia Guaratini Ibelli, Mônica Corrêa Ledur, Maurício Egídio Cantão, Jane de Oliveira Peixoto, Marcos Antonio Zanella Mores, Pricila Baldessar, Rafael Keith Ono, Mariana Groke Marques and 4 more

Abstract read
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In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Monike Willemin QuirinoPrograma de Pós-Graduação em Produção e Sanidade Animal (PGPSA), Instituto Federal Catarinense (IFC), Araquari, SC, 89245-000, Brazil.ORCID 0000-0003-0388-9354
Cleverson HebbelPrograma de Pós-Graduação em Produção e Sanidade Animal (PGPSA), Instituto Federal Catarinense (IFC), Araquari, SC, 89245-000, Brazil.ORCID 0000-0002-0215-8974
Adriana Mércia Guaratini IbelliEmbrapa Suínos e Aves, Concórdia, SC, 89715-899, Brazil. adriana.ibelli@embrapa.br.ORCID 0000-0003-0626-8879
Mônica Corrêa LedurEmbrapa Suínos e Aves, Concórdia, SC, 89715-899, Brazil. monica.ledur@embrapa.br.ORCID 0000-0002-2645-4735
Maurício Egídio CantãoEmbrapa Suínos e Aves, Concórdia, SC, 89715-899, Brazil.ORCID 0000-0002-5988-6542
Jane de Oliveira PeixotoEmbrapa Suínos e Aves, Concórdia, SC, 89715-899, Brazil.ORCID 0000-0002-0644-3684
Marcos Antonio Zanella MoresEmbrapa Suínos e Aves, Concórdia, SC, 89715-899, Brazil.ORCID 0000-0001-9198-8824
Pricila BaldessarPamplona Alimentos S.A., Rio do Sul, SC, 89164-900, Brazil.ORCID 0000-0002-2596-3829
Rafael Keith OnoAgroceres PIC, Rio Claro, SP, 13502-741, Brazil.ORCID 0000-0002-2226-749X
Mariana Groke MarquesPrograma de Pós-Graduação em Produção e Sanidade Animal (PGPSA), Instituto Federal Catarinense (IFC), Araquari, SC, 89245-000, Brazil.ORCID 0000-0002-3110-1280
Vanessa PeripolliPrograma de Pós-Graduação em Produção e Sanidade Animal (PGPSA), Instituto Federal Catarinense (IFC), Araquari, SC, 89245-000, Brazil.ORCID 0000-0002-0463-4727
Rafael da Rosa UlguimSetor de Suínos, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Porto Alegre, RS, 91540-000, Brazil.ORCID 0000-0002-7210-1607
Bernardo Garziera GasperinFiBRA, Faculdade de Veterinária, Universidade Federal de Pelotas, RS, 96160-000, Pelotas, Brazil.ORCID 0000-0002-3715-2345
Ivan BianchiPrograma de Pós-Graduação em Produção e Sanidade Animal (PGPSA), Instituto Federal Catarinense (IFC), Araquari, SC, 89245-000, Brazil. ivan.bianchi@ifc.edu.br.ORCID 0000-0001-8236-3435

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico 305575/2021-0Fundação de Amparo à Pesquisa e Inovação do Estado de Santa Catarina 1367/2022Fundação de Amparo à Pesquisa e Inovação do Estado de Santa Catarina 2021TR000662
6 · The paper itself

Abstract

Anestrus, an infertility condition that affects several animal' species, is characterized by failing to display estrus. In pig production, it leads to the culling of 5 to 15% of the replacement gilts, resulting in significant losses impairing the swine female longevity. Despite that, little is known about the genetic mechanisms involved with anestrus in pigs. Hence, this study evaluated cyclic and non-cyclic F1 Landrace × Large White gilts to identify genomic regions associated with failure to display pubertal estrus through a genome-wide association study (GWAS), highlighting possible candidate genes involved with this condition in swine. Tissue samples were collected at 219.8 ± 4.7 days of age and genotyped with the PorcineSNP50 BeadChip from Illumina. In the GWAS, a SNP in the EML4 gene located on chromosome 3 (SSC3) was moderately associated with anestrus. The other 14 SNPs suggestively associated with anestrus were identified on SSCs 1, 3, 6, 7, 9 and 15. Investigating the regions close to those SNPs, new candidate genes for anestrus occurrence, such as EML4, DST, SRTB, MEAF, PHF1, PPMIB and PREPL, including 11 lncRNAs and a snoRNA were identified. Therefore, our study highlighted novel genetic mechanisms involved with the failure to display pubertal estrus in pigs, contributing to unraveling the genetic architecture of anestrus in pigs and other species. The use of genomic methodologies is a promising tool to help the early identification of gilts with potential reproductive problems associated with anestrus.

Indexed as

EstrusGenome-Wide Association StudyAnimalsFemaleGenomeGenotypePolymorphism, Single NucleotideSwineDelayed pubertyGenetic markersLack of pubertyPigs

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.