Evidence map›Paper›PMID 40934547›Full record

ArticleThe Brazilian journal of infectious diseases : an official publication of the Brazilian Society of Infectious Diseases

Molecular characterization of Human T-cell Lymphotropic Viruses 1 and 2 (HTLV-1 and HTLV-2) in samples from blood donation candidates in the state of Pará, Brazilian Amazon.

Carolina Alcântara Maneschy, Patricia Santos Lobo, Carlos Eduardo de Melo Amaral, Katarine Antonia Dos Santos Barile, Jairo Augusto Americo de Castro, Rodrigo Vellasco Duarte Silvestre, Felipe Bonfim Freitas, Luana Silva Soares, Sylvia Fátima Santos Guerra

Abstract read
In one paragraph

Article in The Brazilian journal of infectious diseases : an official publication of the Brazilian Society of Infectious Diseases. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Carolina Alcântara ManeschyInstituto Evandro Chagas, Sessão de Virologia, Belém, PA, Brazil.
Patricia Santos LoboInstituto Evandro Chagas, Sessão de Virologia, Belém, PA, Brazil.
Carlos Eduardo de Melo AmaralCentro de Hemoterapia e Hematologia do Pará, Gerência de Biologia Molecular, Belém, PA, Brazil.
Katarine Antonia Dos Santos BarileCentro de Hemoterapia e Hematologia do Pará, Gerência de Biologia Molecular, Belém, PA, Brazil.
Jairo Augusto Americo de CastroCentro de Hemoterapia e Hematologia do Pará, Gerência de Biologia Molecular, Belém, PA, Brazil.
Rodrigo Vellasco Duarte SilvestreInstituto Evandro Chagas, Sessão de Virologia, Belém, PA, Brazil.
Felipe Bonfim FreitasInstituto Evandro Chagas, Sessão de Virologia, Belém, PA, Brazil.
Luana Silva SoaresInstituto Evandro Chagas, Sessão de Virologia, Belém, PA, Brazil.
Sylvia Fátima Santos GuerraInstituto Evandro Chagas, Sessão de Virologia, Belém, PA, Brazil. Electronic address: sylviafsguerra@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Human T-Lymphotropic Virus (HTLV) is a retrovirus belonging to the Retroviridae family and the Deltaretrovirus genus, which has a tropism for T lymphocytes. Despite being the first human retrovirus identified, knowledge about its infection remains limited, highlighting the need for further research, especially in Northern Brazil.. This study aimed to phylogenetically characterize HTLV-1 and HTLV-2 samples identified in blood donors from the state of Pará. The phylogenetic characterization was performed using DNA samples from blood donors at the HEMOPA Foundation, collected between January 2015 and December 2021. The 5'LTR regions of HTLV-1 and HTLV-2 were amplified using specific primers with Nested PCR. The amplified products were purified and sequenced using the dideoxynucleotide method, with the same primers used in the Nested PCR, for subsequent phylogenetic analysis and the construction of a sequence database, as well as deposits in GenBank. The phylogenetic analysis of the 5'LTR sequences of HTLV-1 from this study, compared with isolates available in GenBank, showed that 100 samples clustered with Cosmopolitan subtype isolates, Transcontinental subgroup, while 2 samples clustered with Cosmopolitan subtype isolates, Japanese subgroup. Regarding the phylogenetic analysis of HTLV-2 from this study in comparison with other GenBank isolates, most of the isolates clustered with strains described as HTLV-2c, and only three samples clustered with strains described as HTLV-2a. The epidemiological profile found in the analyzed samples consisted mainly of women, with an average age of 40 years and a low level of education. The molecular characterization of the viral genome provides information about the viral subtypes circulating in the population. This information may be important for increasing investments in screening and monitoring individuals infected with HTLV, thereby contributing to prophylactic practices related to infection and the dissemination of knowledge about HTLV.

Indexed as

Blood DonorsHTLV-II InfectionsHTLV-I InfectionsHuman T-lymphotropic virus 1Human T-lymphotropic virus 2AdultBlood DonationBrazilDNA, ViralFemaleHumansMaleMiddle AgedPhylogenyPolymerase Chain ReactionYoung AdultDNA, ViralHTLV-II infectionsHTLV-I infectionsMolecular epidemiologyPhylogenetic analysis

Identifiers

PMID40934547
PMCPMC12793791

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.