Evidence map›Paper›PMID 40934263›Full record

ArticlePLoS genetics2025

Integrative Mendelian randomization for detecting exposure-by-group interactions using group-specific and combined summary statistics.

Ke Xu, Nathaniel Maydanchik, Bowei Kang, Jianhai Chen, Qixiang Chen, Gongyao Xu, Shinya Tasaki, David A Bennett, Lin S Chen

Abstract read
In one paragraph

Article in PLoS genetics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Ke XuDepartment of Public Health Sciences, The University of Chicago, Chicago, Illinois, United States of America.
Nathaniel MaydanchikDepartment of Public Health Sciences, The University of Chicago, Chicago, Illinois, United States of America.ORCID https://orcid.org/0009-0001-9528-3319
Bowei KangDepartment of Public Health Sciences, The University of Chicago, Chicago, Illinois, United States of America.ORCID https://orcid.org/0000-0001-9093-359X
Jianhai ChenDepartment of Public Health Sciences, The University of Chicago, Chicago, Illinois, United States of America.ORCID https://orcid.org/0000-0003-0093-2003
Qixiang ChenDepartment of Public Health Sciences, The University of Chicago, Chicago, Illinois, United States of America.ORCID https://orcid.org/0009-0002-8549-7492
Gongyao XuDepartment of Public Health Sciences, The University of Chicago, Chicago, Illinois, United States of America.ORCID https://orcid.org/0009-0009-2473-2920
Shinya TasakiDepartment of Neurological Sciences and Rush Alzheimer's Disease Center, Rush University Medical Center, Chicago, Illinois, United States of America.
David A BennettDepartment of Neurological Sciences and Rush Alzheimer's Disease Center, Rush University Medical Center, Chicago, Illinois, United States of America.
Lin S ChenDepartment of Public Health Sciences, The University of Chicago, Chicago, Illinois, United States of America.ORCID https://orcid.org/0000-0002-6645-5708

Funding

Integrative multivariate association and genomic analysesR01GM154421 · NIGMS · UNIVERSITY OF CHICAGO · PI Lin Chen · 2024 to 2026
$1.3M
Integrative Analysis Methods for the dGTEx InitiativeUF1MH139345 · NIMH · UNIVERSITY OF CHICAGO · PI CHEN, LIN · 2025 to 2025
$1.2M
Integrative Analysis Methods for the dGTEx InitiativeU01MH139345 · NIMH · UNIVERSITY OF CHICAGO · PI CHEN, LIN · 2024 to 2024
$611k
NIGMS NIH HHS R01 GM154421NIMH NIH HHS U01 MH139345NIMH NIH HHS UF1 MH139345
6 · The paper itself

Abstract

Interactions between risk factors and covariate-defined groups are commonly observed in complex diseases. Existing methods for detecting interactions typically require individual-level data. The data availability and the measurements of risk exposures and covariates often limit the power and applicability in assessing interactions. To address these limitations, we propose int2MR, an integrative Mendelian randomization (MR) method that leverages GWAS summary statistics on exposure traits and group-separated and/or combined GWAS statistics on outcome traits. The int2MR can assess a broad range of risk exposure effects on diseases and traits, revealing interactions unattainable with incomplete or limited individual-level data. Simulation studies demonstrate that int2MR effectively controls type I error rates under various settings while achieving considerable power gains with the integration of additional group-combined GWAS data. We applied int2MR to two data analyses. First, we identified risk exposures with sex-interaction effects on ADHD, and our results suggested potentially elevated inflammation in males. Second, we detected age-group-specific risk factors for Alzheimer's disease pathologies in the oldest-old (age 95+); many of these factors were related to immune and inflammatory processes. Our findings suggest that reduced chronic inflammation may underlie the distinct pathological mechanisms observed in this age group. The int2MR is a robust and flexible tool for assessing group-specific or interaction effects, providing insights into disease mechanisms.

Indexed as

Alzheimer DiseaseAttention Deficit Disorder with HyperactivityMendelian Randomization AnalysisAged, 80 and overComputer SimulationFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansInflammationMalePolymorphism, Single NucleotideRisk Factors

Identifiers

PMID40934263
PMCPMC12440225

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.