Evidence map›Paper›PMID 40931656›Full record

ReviewPhilosophical transactions. Series A, Mathematical, physical, and engineering sciences2025

Physics of microbial taxis and behaviours in response to various physical stimuli.

Takuji Ishikawa, Katsuhiko Sato, Toshihiro Omori, Kenjiro Yoshimura

Abstract readReview
In one paragraph

Review in Philosophical transactions. Series A, Mathematical, physical, and engineering sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Emerging directions for biologically active fluids.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Takuji IshikawaDepartment of Biomedical Engineering, Tohoku University, Sendai, Miyagi, Japan.ORCID 0000-0002-3573-8414
Katsuhiko SatoProgram of Mathematics and Informatics, Faculty of Science, University of Toyama, Toyama, Japan.
Toshihiro OmoriDepartment of Finemechanics, Tohoku University, Sendai, Miyagi, Japan.ORCID 0000-0002-9877-5298
Kenjiro YoshimuraDepartment of Bioscience and Engineering, Shibaura Institute of Technology, Saitama, Japan.

Funding

Japan Science and Technology AgencyJapan Society for the Promotion of Science
6 · The paper itself

Abstract

The physical environment exerts a profound influence on microbial life. The directional movement of cells in response to their physical environment is understood as taxis, which has been studied in biology as chemotaxis, phototaxis, gravitaxis and so forth. These taxis are induced by physiological, physical or both factors. Nevertheless, the physical picture of cellular responses to the environment at the individual cell scale remains unclear. In this review paper, we therefore aim to provide an overview of the recent progress in the physical depiction of microbial taxis and their behaviour in various environments. Four types of responses are discussed: responses to (i) gravity, (ii) light, (iii) surface and (iv) flow. For each response, a simple physical picture is presented that describes the mechanism of behaviours. Knowledge of physical mechanisms will help us to understand the behaviour of cells in various environments at both the individual and population levels. Finally, the future challenges and prospects in this research field are discussed.This article is part of the theme issue 'Biological fluid dynamics: emerging directions'.

Indexed as

Bacterial Physiological PhenomenaModels, BiologicalChemotaxisGravitationLightgravitaxisgyrotaxismicroorganismphototaxisrheotaxisthigmotaxis

Identifiers

PMID40931656
PMCPMC12423654

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.