Evidence map›Paper›PMID 40926010›Full record

ArticleEye (London, England)2025

Personalised genomic strategies improve diagnostic yield in inherited retinal dystrophies: a stepwise, patient-centred approach.

Anna Esteve-Garcia, Ariadna Padró-Miquel, Jaume Català-Mora, Cristina Sau, Delia Yubero, Zelia Corradi, Frans P M Cremers, Pilar Barberán-Martínez, José M Millán, Gema García-García and 4 more

Abstract read
In one paragraph

Article in Eye (London, England), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Anna Esteve-GarciaClinical Genetics Unit, Metropolitan South Clinical Laboratory, Bellvitge University Hospital, Institut d'Investigació Biomèdica de Bellvitge (IDIBELL), L'Hospitalet de Llobregat, Barcelona, Spain.ORCID http://orcid.org/0000-0002-6005-2756
Ariadna Padró-MiquelGenetics Laboratory, Metropolitan South Clinical Laboratory, Bellvitge University Hospital, Institut d'Investigació Biomèdica de Bellvitge (IDIBELL), L'Hospitalet de Llobregat, Barcelona, Spain.ORCID http://orcid.org/0000-0002-6488-447X
Jaume Català-MoraDepartment of Ophthalmology, SJD Barcelona Children's Hospital, Esplugues de Llobregat, Barcelona, Spain.
Cristina SauClinical Genetics Unit, Metropolitan South Clinical Laboratory, Bellvitge University Hospital, Institut d'Investigació Biomèdica de Bellvitge (IDIBELL), L'Hospitalet de Llobregat, Barcelona, Spain.
Delia YuberoCentre for Biomedical Research on Rare Diseases (CIBERER), Instituto de Salud Carlos III, Madrid, Spain.
Zelia CorradiDepartment of Human Genetics, Radboud University Medical Center, Nijmegen, the Netherlands.
Frans P M CremersDepartment of Human Genetics, Radboud University Medical Center, Nijmegen, the Netherlands.
Pilar Barberán-MartínezMolecular, Cellular, and Genomic Biomedicine Group, IIS-La Fe, Valencia, Spain.ORCID http://orcid.org/0000-0002-3604-7068
José M MillánCentre for Biomedical Research on Rare Diseases (CIBERER), Instituto de Salud Carlos III, Madrid, Spain.
Gema García-GarcíaCentre for Biomedical Research on Rare Diseases (CIBERER), Instituto de Salud Carlos III, Madrid, Spain.
Ilyana IsmaelDepartment of Ophthalmology, Bellvitge University Hospital, Institut d'Investigació Biomèdica de Bellvitge (IDIBELL), L'Hospitalet de Llobregat, Barcelona, Spain.
Luis AriasDepartment of Ophthalmology, Bellvitge University Hospital, Institut d'Investigació Biomèdica de Bellvitge (IDIBELL), L'Hospitalet de Llobregat, Barcelona, Spain.
Estefania CobosHereditary Retinal Dystrophies Unit, Ophthalmology Departments, SJD Barcelona Children's Hospital and University Hospital of Bellvitge, Barcelona, 08950, Spain. ecobos@bellvitgehospital.cat.
Cinthia AguileraGenetics Laboratory, Metropolitan South Clinical Laboratory, Bellvitge University Hospital, Institut d'Investigació Biomèdica de Bellvitge (IDIBELL), L'Hospitalet de Llobregat, Barcelona, Spain. caguilerar@bellvitgehospital.cat.ORCID http://orcid.org/0000-0002-0363-8590

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundInherited retinal dystrophies (IRDs) are a genetically heterogeneous group of conditions, with approximately 40% of cases remaining unresolved after initial genetic testing. This study aimed to assess the impact of a personalised genomic approach integrating whole-exome sequencing (WES) reanalysis, whole-genome sequencing (WGS), customised gene panels and functional assays to improve diagnostic yield in unresolved cases. SUBJECTS/

methodsWe retrospectively reviewed a cohort of 597 individuals with IRDs, including 525 probands and 72 affected relatives. Among the 221 genetically unresolved cases, a subset of 101 was selected for stepwise re-evaluation. This included WES reanalysis with updated virtual panels, WGS in selected cases and targeted sequencing of complex regions. Variant interpretation was refined using updated classification criteria, segregation analysis and functional assays such as mRNA and minigene/midigene studies.

resultsAn initial diagnostic yield of 59.6% (313/525) was achieved through first-tier genetic testing. Re-evaluation of the 101 prioritised cases resulted in 42 new diagnoses in probands and resolution of 7 more familial cases, yielding 49 additional diagnoses among previously unresolved patients (48.5%). This increased the overall diagnostic rate for probands to 67.6% (355/525). Functional assays confirmed pathogenicity of variants in ABCA4, ATF6, REEP6, and TULP1, while WGS enabled the detection of structural and deep intronic variants, further enhancing diagnostic accuracy.

conclusionsA patient-centred, stepwise genomic approach significantly improved the molecular diagnosis of IRDs. This strategy supports the clinical utility of periodic WES reanalysis and targeted use of customised panels, WGS and functional assays. The proposed workflow is scalable and applicable to routine clinical practice, contributing to precision medicine in IRDs.

Indexed as

Genetic TestingGenomicsMutationPrecision MedicineRetinal DystrophiesAdolescentAdultChildChild, PreschoolExome SequencingFemaleHumansMaleMiddle AgedPatient-Centered CarePedigree

Identifiers

PMID40926010
PMCPMC12583820

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.