Evidence map›Paper›PMID 40925983›Full record

ArticleNature chemical biology2026

Navigating condensate micropolarity to enhance small-molecule drug targeting.

Jian Ouyang, Junlin Chen, Zhili Wu, Kaiqiang You, Taoyu Chen, Yi Qin Gao, Pilong Li, Xin Zhang, Tingting Li

Erratum issuedAbstract read
PubMed Publisher
In one paragraph

Article in Nature chemical biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Jian Ouyang *Department of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Peking University Health Science Center, Beijing, China.ORCID http://orcid.org/0009-0007-5766-0711
Junlin Chen *Zhejiang Key Laboratory of Precise Synthesis of Functional Molecules, Department of Chemistry and Research Center for Industries of the Future and Westlake University, Hangzhou, China.
Zhili WuZhejiang Key Laboratory of Precise Synthesis of Functional Molecules, Department of Chemistry and Research Center for Industries of the Future and Westlake University, Hangzhou, China.
Kaiqiang YouDepartment of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Peking University Health Science Center, Beijing, China.ORCID http://orcid.org/0000-0002-5038-1185
Taoyu ChenDepartment of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Peking University Health Science Center, Beijing, China.ORCID http://orcid.org/0000-0002-8966-1264
Yi Qin GaoCollege of Chemistry and Molecular Engineering, Peking University, Beijing, China.ORCID http://orcid.org/0000-0002-4309-9376
Pilong LiState Key Laboratory of Membrane Biology, Beijing Frontier Research Center for Biological Structure, School of Life Sciences, Tsinghua University, Beijing, China.ORCID http://orcid.org/0000-0002-1783-3100
Xin ZhangZhejiang Key Laboratory of Precise Synthesis of Functional Molecules, Department of Chemistry and Research Center for Industries of the Future and Westlake University, Hangzhou, China. zhangxin@westlake.edu.cn.ORCID http://orcid.org/0000-0001-6686-1645
Tingting LiDepartment of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Peking University Health Science Center, Beijing, China. litt@hsc.pku.edu.cn.ORCID http://orcid.org/0000-0003-4266-0317

Funding

National Natural Science Foundation of China (National Science Foundation of China) 22494700, 22494702National Natural Science Foundation of China (National Science Foundation of China) T2325003
6 · The paper itself

Abstract

Many pharmaceutical targets partition into biomolecular condensates, whose microenvironments can significantly influence drug distribution. Nevertheless, it is unclear how drug design principles should adjust for these targets to optimize target engagement. To address this question, we systematically investigated how condensate microenvironments influence drug-targeting efficiency. We found that condensates highlight a notable heterogeneity, with nonpolar-residue-enriched condensates being more hydrophobic and housing more hydrophobic drugs. Furthermore, L1000 dataset analysis revealed a strong positive correlation between inhibitor hydrophobicity and targeting efficiency for phase-separated proteins, represented by estrogen receptor 1 (ESR1) enriched with nonpolar residues. We developed random forest models to predict inhibitor targeting efficiency from molecular properties, with hydrophobicity identified as a key determinant. In cellulo experiments with ESR1 condensates confirmed that both binding affinity and hydrophobicity of inhibitors contribute significantly to potency. These results suggest a new drug design principle for phase-separated proteins by considering condensate micropolarity, potentially leading to drugs with optimal target engagement.

Indexed as

Biomolecular CondensatesDrug Delivery SystemsEstrogen Receptor alphaSmall Molecule LibrariesDrug DesignHumansHydrophobic and Hydrophilic InteractionsProtein BindingESR1 protein, humanEstrogen Receptor alphaSmall Molecule Libraries

Identifiers

PMID40925983

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.