Evidence map›Paper›PMID 40924792›Full record

ArticlePloS one2025

CaOx crystal nuclei are formed in rat outer cortex proximal tubules by a potential fibrinogen-dependent mechanism.

Kenshirou Kunii, Shigeru Sugiki, Chiharuko Ushimoto, Shinya Inoue, Nobuyo Morita, Yuka Nakamura, Tetsuhiro Horie, Takuya Sakamoto, Hiromi Sakata-Haga, Jia Han and 4 more

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Kenshirou KuniiDepartment of Urology, Kanazawa Medical University, Kahoku, Ishikawa, Japan.ORCID 0009-0000-8614-5195
Shigeru SugikiDepartment of Urology, Kanazawa Medical University, Kahoku, Ishikawa, Japan.
Chiharuko UshimotoDepartment of Urology, Kanazawa Medical University, Kahoku, Ishikawa, Japan.
Shinya InoueDepartment of Urology, Kanazawa Medical University, Kahoku, Ishikawa, Japan.ORCID 0000-0001-8639-6955
Nobuyo MoritaDepartment of Urology, Kanazawa Medical University, Kahoku, Ishikawa, Japan.
Yuka NakamuraMedical Research Institute, Kanazawa Medical University, Kahoku, Ishikawa, Japan.
Tetsuhiro HorieMedical Research Institute, Kanazawa Medical University, Kahoku, Ishikawa, Japan.ORCID 0000-0002-2095-9425
Takuya SakamotoMedical Research Institute, Kanazawa Medical University, Kahoku, Ishikawa, Japan.
Hiromi Sakata-HagaDepartment of Anatomy I, Kanazawa Medical University, Kahoku, Ishikawa, Japan.
Jia HanDepartment of Clinical Pathology, Kanazawa Medical University, Kahoku, Ishikawa, Japan.
Toshihisa HattaDepartment of Anatomy I, Kanazawa Medical University, Kahoku, Ishikawa, Japan.
Yasuhito IshigakiMedical Research Institute, Kanazawa Medical University, Kahoku, Ishikawa, Japan.
Sohsuke YamadaDepartment of Clinical Pathology, Kanazawa Medical University, Kahoku, Ishikawa, Japan.ORCID 0000-0003-2662-0024
Katsuhito MiyazawaDepartment of Urology, Kanazawa Medical University, Kahoku, Ishikawa, Japan.ORCID 0000-0002-0331-3753

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Calcium oxalate (CaOx) stones are prevalent in urinary tract stone disease. While their formation can be induced in rats by administering ethylene glycol and vitamin D, the initial nucleation and formation processes are unclear. Here, we aimed to determine where CaOx crystals initially form, examine the associated histological and morphological changes, and clarify the genes whose expression varies at those sites and their function. Male Wistar rats were divided into four groups: control, ethylene glycol, vitamin D, and ethylene glycol plus vitamin D (EG + VitD). Crystal development locations were mapped on kidney tissue sections, and the initial crystal site distribution was revealed. CaOx crystal formation was observed only in the EG + VitD group kidneys, predominantly in the proximal tubules in the outer renal cortex. The tubular luminal area was significantly increased (P < 0.05), especially in proximal tubules, correlating with the crystal occurrence number. Moreover, aquaporin1 and calbindin staining identified the tubular segments hosting initial crystal formation, and the tubular dilation was calculated. DNA microarray was analyzed on cortical and medullary kidney tissues to detect stone formation-related gene expression changes. Genes with variable expression were further examined using RT-PCR and immunohistochemistry to analyze their distribution. FGA, Slc7a9, Slc7a7, and TRPV5 were significantly upregulated in the renal cortex, and FGA was significantly upregulated in the proximal tubules, consistent with the crystal formation sites. Early phase crystallization primarily occurs in the proximal tubules. In silico analysis, FGA protein has multiple oxalic acid-binding sites, making it a potential new factor promoting CaOx crystal formation.

Indexed as

Calcium OxalateKidney CalculiKidney CortexKidney Tubules, ProximalAnimalsCalcium ChannelsCrystallizationEthylene GlycolMaleRatsRats, WistarTRPV Cation ChannelsVitamin DCalcium ChannelsCalcium OxalateEthylene GlycolTRPV5 protein, ratTRPV Cation ChannelsVitamin D

Identifiers

PMID40924792
PMCPMC12419635

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.