Evidence map›Paper›PMID 40924716›Full record

ArticlePloS one2025

Comprehensive analysis of disulfidptosis-related genes in pulmonary hypertension through machine learning and immune infiltration: Spotlight on USP32 and ZNF655 as key regulators.

Riken Chen, Dingyu Guo, Jiahua Pan, Lingpin Pang, Jie Sun, Qian Xian, Tao Huang, Junfen Cheng, Jihuang Huang, Xianbing Zeng and 4 more

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Riken ChenRespiratory and Critical Care Medicine, The Second Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China.
Dingyu GuoEmergency Medicine Center, Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China.ORCID 0009-0000-7525-6615
Jiahua PanEmergency Medicine Center, Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China.
Lingpin PangEmergency Medicine Center, Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China.
Jie SunEmergency Medicine Center, Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China.
Qian XianEmergency Medicine Center, Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China.
Tao HuangEmergency Medicine Center, Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China.
Junfen ChengRespiratory and Critical Care Medicine, The Second Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China.
Jihuang HuangEmergency Medicine Center, Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China.
Xianbing ZengLianjiang People's Hospital, Zhanjiang, Guangdong, China.
Guojun YangLianjiang People's Hospital, Zhanjiang, Guangdong, China.
Shiyan QiLianjiang People's Hospital, Zhanjiang, Guangdong, China.
Wenliang ChenScientific Research Center, The Second Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China.
Xishi SunRespiratory and Critical Care Medicine, The Second Affiliated Hospital of Guangdong Medical University, Zhanjiang, Guangdong, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDisulfidptosis, a novel cellular death manner, has yet to be fully explored within the context of pulmonary arterial hypertension (PAH). This study aims to identify genes implicated in PAH that are involved in disulfidptosis.

methodBased on data from the GEO database, this study employed co-expression analysis, Weighted Gene Co-Expression Network Analysis (WGCNA), hub gene identification, and Gene Set Enrichment Analysis (GSEA) to uncover genes associated with PAH and disulfidptosis. Subsequent machine learning validation and functional GSEA further refined the identification of pivotal genes. The investigation extended to examining immune cell involvement via immune infiltration techniques and elucidates the hub genes' roles within ceRNA networks.

resultThe integrative approach of co-expression analysis and WGCNA identified genes at the intersection of PAH and disulfidptosis. GSEA revealed their roles in essential biological processes and pathways, such as mRNA processing and cytoplasmic DNA sensing pathway. Prominently, USP32 and ZNF655 were identified as significant hub genes through machine learning analysis, demonstrating notable diagnostic potential across various datasets. Further, immune infiltration studies and ceRNA regulatory network construction revealed the intricate association between these genes and differential immune cell expression, alongside miRNA and lncRNA regulatory networks.

conclusionsThis study elucidates the contributory role of USP32 and ZNF655 in the pathogenesis of PAH, making them as critical genes within the disulfidptosis pathway.

Indexed as

DisulfidptosisKruppel-Like Transcription FactorsMachine LearningPulmonary Arterial HypertensionUbiquitin ThiolesteraseDatasets as TopicGene Expression ProfilingGene Expression RegulationGene Regulatory NetworksHumansRNA, Competitive EndogenousKruppel-Like Transcription FactorsRNA, Competitive EndogenousUbiquitin ThiolesteraseUSP10 protein, humanZNF655 protein, human

Identifiers

PMID40924716
PMCPMC12419597

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.