Evidence map›Paper›PMID 40923769›Full record

ArticleNucleic acids research2025

Nuclear compression-mediated DNA damage drives ATR-dependent Lamin expression and mouse ESC differentiation.

Tanusri Roy, Swetlana Ghosh, Niyati Piplani, Lakshmi Kavitha Sthanam, Niharika Tiwary, Sayak Dhar, W Chingmei Wangsa Konyak, Santosh Surendra Panigrahi, Priya Singh, Divya Tej Sowpati and 4 more

Abstract read
In one paragraph

Article in Nucleic acids research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Tanusri RoyDepartment of Biosciences & Bioengineering, IIT Bombay, Mumbai 400076, India.ORCID 0009-0006-7042-8557
Swetlana GhoshDepartment of Biosciences & Bioengineering, IIT Bombay, Mumbai 400076, India.ORCID 0009-0002-7469-9830
Niyati PiplaniDepartment of Biosciences & Bioengineering, IIT Bombay, Mumbai 400076, India.ORCID 0000-0002-6032-0730
Lakshmi Kavitha SthanamDepartment of Biosciences & Bioengineering, IIT Bombay, Mumbai 400076, India.ORCID 0000-0002-8430-3505
Niharika TiwaryCentre for Cellular and Molecular Biology, Hyderabad 500007, India.ORCID 0009-0007-1855-0464
Sayak DharDepartment of Biosciences & Bioengineering, IIT Bombay, Mumbai 400076, India.ORCID 0009-0007-7142-7289
W Chingmei Wangsa KonyakDepartment of Biosciences & Bioengineering, IIT Bombay, Mumbai 400076, India.ORCID 0000-0002-4763-1489
Santosh Surendra PanigrahiDepartment of Biosciences & Bioengineering, IIT Bombay, Mumbai 400076, India.ORCID 0009-0003-3933-2504
Priya SinghCentre for Cellular and Molecular Biology, Hyderabad 500007, India.ORCID 0000-0001-7458-2937
Divya Tej SowpatiCentre for Cellular and Molecular Biology, Hyderabad 500007, India.ORCID 0000-0003-4340-6011
Sreelaja NairDepartment of Biosciences & Bioengineering, IIT Bombay, Mumbai 400076, India.ORCID 0000-0001-7309-339X
Sushil KumarDepartment of Biosciences & Bioengineering, IIT Bombay, Mumbai 400076, India.ORCID 0000-0003-0547-745X
P Chandra ShekarCentre for Cellular and Molecular Biology, Hyderabad 500007, India.ORCID 0000-0002-1737-2105
Shamik SenDepartment of Biosciences & Bioengineering, IIT Bombay, Mumbai 400076, India.ORCID 0000-0002-8639-8659

Funding

CSIR fellowship 09/087(0927)/2017-EMR-IDepartment of Biotechnology BT/PR34522/MED/31/417/2019IIT BombayMadhuri Sinha Chair Professorship funds
6 · The paper itself

Abstract

Embryonic stem cells (ESCs), which are susceptible to DNA damage, depend on a robust and highly efficient DNA damage response (DDR) mechanism for their survival. However, the implications of physical force-mediated DNA damage on ESC fate remain unclear. We show that stiffness-dependent spreading of mouse ESCs (mESCs) induces DNA damage through nuclear compression, with DNA damage causing differentiation through Lamin A/C. Interestingly, differentiation is associated with DNA damage and activation of the DDR factors such as ATR and CHK1. While ATR is typically known to play roles in DDR pathway, its role during stiffness-mediated nuclear compression and mESC differentiation is unknown. While our results show activation of CHK1 pathway and nuclear enrichment of activated ATR on stiff substrates, inhibiting ATR and CHK1 both result in reduction of Lamin A/C expression by different mechanisms. Overall, we demonstrate that mESC differentiation is driven by nuclear compression-mediated DNA damage and involves ATR-dependent modulation of Lamin A/C.

Indexed as

Ataxia Telangiectasia Mutated ProteinsCell DifferentiationCell NucleusDNA DamageLamin Type AMouse Embryonic Stem CellsAnimalsCheckpoint Kinase 1MiceAtaxia Telangiectasia Mutated ProteinsAtr protein, mouseCheckpoint Kinase 1Chek1 protein, mouseLamin Type A

Identifiers

PMID40923769
PMCPMC12418392

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.