Evidence map›Paper›PMID 40923589›Full record

ArticleNucleic acids research2026

TCRdb 2.0: an updated T-cell receptor sequence database.

Tao Yue, Si-Yi Chen, Wen-Kang Shen, Yu Liao, Qian Lei, An-Yuan Guo

Abstract read
In one paragraph

Article in Nucleic acids research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Tao YueDepartment of Thoracic Surgery, West China Biomedical Big Data Center, West China Hospital, Sichuan University, Chengdu 610041, China.ORCID 0000-0002-7500-1433
Si-Yi ChenDepartment of Rheumatology & Immunology, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430021, China.ORCID 0000-0001-8076-0576
Wen-Kang ShenDepartment of Thoracic Surgery, West China Biomedical Big Data Center, West China Hospital, Sichuan University, Chengdu 610041, China.ORCID 0000-0002-9168-4465
Yu LiaoDepartment of Thoracic Surgery, West China Biomedical Big Data Center, West China Hospital, Sichuan University, Chengdu 610041, China.
Qian LeiDepartment of Thoracic Surgery, West China Biomedical Big Data Center, West China Hospital, Sichuan University, Chengdu 610041, China.
An-Yuan GuoDepartment of Thoracic Surgery, West China Biomedical Big Data Center, West China Hospital, Sichuan University, Chengdu 610041, China.

Funding

National Natural Science Foundation of China 32370717National Natural Science Foundation of China 82271599West China Hospital of Sichuan University ZYYC23007
6 · The paper itself

Abstract

T-cell receptor (TCR) repertoire sequencing allows researchers to analyze millions of TCRs, providing unparalleled precision in understanding immune responses and enabling broad applications. However, existing TCR-related databases are based on a limited number of samples. Here, we present TCRdb2.0 (https://guolab.wchscu.cn/TCRdb2/#/), an updated and significantly expanded resource with enriched data and enhanced functionalities. TCRdb2.0 incorporates ∼700 million TCR sequences derived from 19 701 TCR-Seq samples across 46 tissues and 147 clinical conditions, making it the most comprehensive TCR sequence database to date. The homepage of TCRdb2.0 has powerful browsing, searching and downloading functions. It displays multiple features of TCR in sample and project levels. Compared to the previous release, TCRdb2.0 has the following major improvements: (i) a substantial increase of TCR sequences, from 277 million to ∼700 million; (ii) inclusion of TCR sequences from Gamma delta (γδ) T cells; (iii) integration of therapy-related TCR-Seq datasets, such as programmed cell death 1 (PD-1) blockade immunotherapy; (iv) construction of the largest TCR sequence reference from healthy samples; and (v) redesign of a new search and download function, enabling flexible queries and downloads. With its extensive data and user-friendly web interface, TCRdb2.0 will serve as an invaluable resource for functional studies of TCRs in both health and disease.

Indexed as

Databases, GeneticReceptors, Antigen, T-CellHumansSoftwareReceptors, Antigen, T-Cell

Identifiers

PMID40923589
PMCPMC12807725

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.