Evidence map›Paper›PMID 40922807›Full record

ArticleJOR spine2025

A Cross-Tissue Transcriptome-Wide Association Study Identified Susceptibility Genes for Intervertebral Disc Degeneration.

Li Zhang, Wen Zhao, Hongsheng Yang, Tingting Deng, Yugang Li

Abstract read
In one paragraph

Article in JOR spine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Li ZhangDepartment of Orthopedics The First Affiliated Hospital of Chengdu Medical College Chengdu Sichuan China.
Wen ZhaoDepartment of Orthopedics The First Affiliated Hospital of Chengdu Medical College Chengdu Sichuan China.
Hongsheng YangDepartment of Orthopedics The First Affiliated Hospital of Chengdu Medical College Chengdu Sichuan China.
Tingting DengDepartment of Orthopedics The First Affiliated Hospital of Chengdu Medical College Chengdu Sichuan China.
Yugang LiDepartment of Orthopedics The First Affiliated Hospital of Chengdu Medical College Chengdu Sichuan China.ORCID https://orcid.org/0009-0008-3923-3828

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Intervertebral disc degeneration (IDD) is a prevalent spinal condition frequently associated with pain and motor impairment, imposing a substantial burden on quality of life. Despite extensive investigations into the genetic predisposition to IDD, the precise pathogenic genes and molecular pathways involved remain inadequately characterized, underscoring the need for continued research to clarify its genetic underpinnings. Methods: This study leveraged IDD data from the FinnGen R12 cohort and integrated expression quantitative trait loci data across 49 tissues from the Genotype-Tissue Expression version 8 database to perform a cross-tissue transcriptome-wide association study (TWAS). The analytical framework incorporated functional summary-based imputation (FUSION), unified test for molecular signatures (UTMOST), and gene-level analysis via multi-marker genome annotation (MAGMA). To substantiate the findings, Mendelian randomization (MR) and colocalization analyses were subsequently conducted. Results: Through TWAS and MAGMA analyses, 33 susceptibility genes associated with IDD were identified. Subsequent MR and colocalization analyses refined this list to six candidate genes-ADD1, GFPT1, MAPRE3, MSANTD1, SLC30A6, and XBP1-which may contribute to the initiation and progression of IDD by modulating pathways implicated in the endoplasmic reticulum stress response. Conclusion: Six susceptibility genes associated with the risk of IDD were identified in this study, offering novel insights into the genetic architecture and potential pathogenic pathways underpinning the development of IDD.

Indexed as

colocalization analysisintervertebral disc degenerationmulti‐marker genome annotationtranscriptome‐wide association study

Identifiers

PMID40922807
PMCPMC12414482

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.