Evidence map›Paper›PMID 40922130›Full record

ArticleAsia-Pacific journal of clinical oncology2026

USP44, ZNF454, and GPRC5B ctDNA Methylation Markers in Breast Cancer: Limited Clinical Relevance for Disease Monitoring and Tumor Characteristics.

Young Ju Jeong, Chang-Ho Jeon, Hoon Kyu Oh, Jeong Kyu Kim, Chun-Seok Yang, Na-Rang Lee, Doyeon Kim

Abstract read
In one paragraph

Article in Asia-Pacific journal of clinical oncology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Young Ju JeongDepartment of Surgery, School of Medicine, Daegu Catholic University, Daegu, Republic of Korea.
Chang-Ho JeonDepartment of Laboratory Medicine, School of Medicine, Daegu Catholic University, Daegu, Republic of Korea.
Hoon Kyu OhDepartment of Pathology, School of Medicine, Daegu Catholic University, Daegu, Republic of Korea.
Jeong Kyu KimDepartment of Otolaryngology, Head and Neck Surgery, School of Medicine, Daegu Catholic University, Daegu, Republic of Korea.
Chun-Seok YangDepartment of Surgery, School of Medicine, Daegu Catholic University, Daegu, Republic of Korea.
Na-Rang LeeDepartment of Surgery, School of Medicine, Daegu Catholic University, Daegu, Republic of Korea.
Doyeon KimDepartment of Surgery, School of Medicine, Daegu Catholic University, Daegu, Republic of Korea.

Funding

Daegu Catholic University Medical Center 2020
6 · The paper itself

Abstract

purposeThis study aimed to identify breast cancer-specific circulating tumor DNA (ctDNA) methylation markers that correspond to tissue DNA methylation.

methodsUsing The Cancer Genome Atlas (TCGA) database, we selected breast cancer-specific DNA methylation markers. The methylation and expression patterns of candidate genes were analyzed in breast cancer cell lines and tissue samples. We also assessed the methylation status in ctDNA obtained from breast cancer patients and examined associations with the clinicopathological features.

resultsAmong candidate genes with breast cancer-specific methylation patterns, USP44, ZNF454, and GPRC5B were selected. The methylation status and expression of selected genes varied by molecular subtype of cancer in the cell line. In tissue samples, expression of all three genes was generally lower in breast cancer than in controls. ctDNA methylation patterns showed no significant change before and after treatment for each candidate gene. Correlations between gene expression and DNA methylation status or clinicopathological characteristics in cancer tissues differed among genes.

conclusionFurther studies are needed for clinical application of liquid biopsy using methylation analysis for ctDNA according to individual characteristics for breast cancer.

Indexed as

Biomarkers, TumorBreast NeoplasmsCirculating Tumor DNADNA MethylationReceptors, G-Protein-CoupledUbiquitin-Specific ProteasesAdultAgedClinical RelevanceFemaleHumansMiddle AgedBiomarkers, TumorCirculating Tumor DNAReceptors, G-Protein-CoupledUbiquitin-Specific Proteasesbreast cancerctDNAdifferential methylationDNA methylationliquid biopsy

Identifiers

PMID40922130
PMCPMC13007754

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.