Evidence map›Paper›PMID 40920745›Full record

ArticlePloS one2025

ACG-SFE: Adaptive cluster-guided simple, fast, and efficient feature selection for high-dimensional microarray data in binary classification.

Yi Wei Tye, XinYing Chew, Umi Kalsom Yusof, Samat Tulpar

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Yi Wei TyeSchool of Computer Sciences, Universiti Sains Malaysia, Gelugor, Penang, Malaysia.
XinYing ChewSchool of Computer Sciences, Universiti Sains Malaysia, Gelugor, Penang, Malaysia.ORCID https://orcid.org/0000-0001-5539-1959
Umi Kalsom YusofSchool of Computing and Informatics, Albukhary International University, Alor Setar, Kedah, Malaysia.
Samat TulparSmart Manufacturing and Artificial Intelligence, Micron Memory Malaysia Sdn. Bhd., Batu Kawan, Penang, Malaysia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Advances in data collection have resulted in an exponential growth of high-dimensional microarray datasets for binary classification in bioinformatics and medical diagnostics. These datasets generally possess many features but relatively few samples, resulting in challenges associated with the "curse of dimensionality", such as feature redundancy and an elevated risk of overfitting. While traditional feature selection approaches, such as filter-based and wrapper-based approaches, can help to reduce dimensionality, they often struggle to capture feature interactions while adequately preserving model generalization. Therefore, this paper introduces the Adaptive Cluster-Guided Simple, Fast, and Efficient (ACG-SFE) feature selection, a hybrid approach designed to address the challenges of high-dimensional microarray data in binary classification. ACG-SFE enhances the Simple, Fast, and Efficient (SFE) evolutionary feature selection model by integrating hierarchical clustering to dynamically group correlated features based on the optimal number of clusters determined by the Silhouette index, Davies-Bouldin score, and the feature-to-observation ratio while adaptively selecting representative features within clusters using mutual information and adjusting the selection threshold through a progress factor. This hybrid filter-wrapper approach improves feature interactions, effectively minimizing redundancy and overfitting while enhancing classification performance. The proposed model is assessed against four state-of-the-art evolutionary feature selection models on 11 high-dimensional microarray datasets. Experimental results indicate that ACG-SFE effectively selects a small yet pertinent feature subset, minimizing redundancy while attaining enhanced classification accuracy and F-measure. Furthermore, its reduced RMSE between train and test accuracy substantiates its capability to reduce overfitting, outperforming comparative models. These findings establish ACG-SFE as an effective feature selection model for handling high-dimensional microarray data in binary classification, enhancing classification accuracy while selecting minimal relevant features to reduce unnecessary complexity and the risk of overfitting.

Indexed as

Computational BiologyOligonucleotide Array Sequence AnalysisAlgorithmsCluster AnalysisGene Expression ProfilingHumans

Identifiers

PMID40920745
PMCPMC12416689

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.