Evidence map›Paper›PMID 40918954›Full record

ArticleFrontiers in plant science2025

Dynamic transcriptomic responses to soybean cyst nematode infection in soybean genotypes with contrasting resistance profiles.

Nour Nissan, Nathalie Puchacz, Julia C Hooker, Dave T Ste-Croix, Gerardo Zapata, François Lefebvre, Martin Charette, Ashkan Golshani, Elroy Cober, Benjamin Mimee and 1 more

Abstract read
In one paragraph

Article in Frontiers in plant science, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Nour Nissan *Ottawa Research and Development Centre, Agriculture and Agri-Food Canada, Ottawa, ON, Canada.
Nathalie Puchacz *Ottawa Research and Development Centre, Agriculture and Agri-Food Canada, Ottawa, ON, Canada.
Julia C HookerOttawa Research and Development Centre, Agriculture and Agri-Food Canada, Ottawa, ON, Canada.
Dave T Ste-CroixSaint-Jean-sur-Richelieu Research and Development Centre, Agriculture and Agri-Food Canada, Saint-Jean-sur-Richelieu, QC, Canada.
Gerardo ZapataCanadian Centre for Computational Genomics, Montréal, QC, Canada.
François LefebvreCanadian Centre for Computational Genomics, Montréal, QC, Canada.
Martin CharetteOttawa Research and Development Centre, Agriculture and Agri-Food Canada, Ottawa, ON, Canada.
Ashkan GolshaniDepartment of Biology, Ottawa Institute of Systems Biology, Carleton University, Ottawa, ON, Canada.
Elroy CoberOttawa Research and Development Centre, Agriculture and Agri-Food Canada, Ottawa, ON, Canada.
Benjamin MimeeSaint-Jean-sur-Richelieu Research and Development Centre, Agriculture and Agri-Food Canada, Saint-Jean-sur-Richelieu, QC, Canada.
Bahram SamanfarOttawa Research and Development Centre, Agriculture and Agri-Food Canada, Ottawa, ON, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Soybean cyst nematode populations are rapidly evolving to overcome the limited genetic resistance currently employed in commercial soybean varieties, threatening the future of crop production. To mitigate that, it is crucial to identify novel sources of resistance. Soybean lines PI 561310 and PI 567295 were previously found to exhibit partial SCN resistance despite lacking resistant alleles at Methods: In an attempt to elucidate their resistance mechanisms, PI 561310 and PI 567295 alongside susceptible Essex and resistant Peking and PI 88788 lines were infected with SCN HG type 0. Control and infected root tissues were collected at 5 and 10 day post-infection for RNA sequencing and comparative transcriptomic response analyses were performed. Results and discussion: The resistance mechanism employed by PI 561310 appears to be driven by the expression of

Indexed as

differential expressionRNA-seqSCNSCN resistancesoybeansoybean cyst nematode

Identifiers

PMID40918954
PMCPMC12408572

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.