Evidence map›Paper›PMID 40918463›Full record

ArticleOncology research2025

Immunogenic Cell Death Genes Related Prognostic Biomarker in Hepatocellular Carcinoma.

Bi Feng, Siqi Yang, Zhiqiang He, Yushi Dai, Ruiqi Zou, Yafei Hu, Haijie Hu, Fuyu Li

Abstract read
In one paragraph

Article in Oncology research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Bi FengDivision of Biliary Tract Surgery, Department of General Surgery, West China Hospital of Sichuan University, Chengdu, 610041, China.
Siqi YangDivision of Biliary Tract Surgery, Department of General Surgery, West China Hospital of Sichuan University, Chengdu, 610041, China.
Zhiqiang HeDivision of Biliary Tract Surgery, Department of General Surgery, West China Hospital of Sichuan University, Chengdu, 610041, China.
Yushi DaiDivision of Biliary Tract Surgery, Department of General Surgery, West China Hospital of Sichuan University, Chengdu, 610041, China.
Ruiqi ZouDivision of Biliary Tract Surgery, Department of General Surgery, West China Hospital of Sichuan University, Chengdu, 610041, China.
Yafei HuDivision of Biliary Tract Surgery, Department of General Surgery, West China Hospital of Sichuan University, Chengdu, 610041, China.
Haijie HuDivision of Biliary Tract Surgery, Department of General Surgery, West China Hospital of Sichuan University, Chengdu, 610041, China.
Fuyu LiDivision of Biliary Tract Surgery, Department of General Surgery, West China Hospital of Sichuan University, Chengdu, 610041, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objectives: Hepatocellular carcinoma (HCC) is among the most frequently occurring malignant tumors of the digestive tract and is associated with an increased mortality rate worldwide. This study aimed to develop and validate a prognostic model based on immunogenic cell death (ICD)-related genes to predict patient survival and guide individualized treatment strategies for HCC. Methods: ICD-related genes were identified from the GeneCards database using a relevance score threshold of >10. A combination of least absolute shrinkage and selection operator (LASSO) regression and multivariate Cox analysis was used to screen prognostic genes and construct a risk score model. Immune cell infiltration was evaluated through single-sample gene set enrichment analysis (ssGSEA) and cell-type identification by estimating relative subsets of RNA transcripts (CIBERSORT) algorithms. Associations between risk groups and the tumor microenvironment (TME), N6-methyladenosine (m6A) regulators, and immune checkpoint expression were analyzed. Drug sensitivity was predicted based on the risk stratification. The reliability of the model was validated in internal cohorts and further confirmed by quantitative reverse transcription polymerase chain reaction (qRT-PCR) and immunohistochemistry (IHC). Results: A six-gene signature (CFHR3, G6PD, IGHM, KPNA2, PON1, and SERPINE1) was identified and used to calculate the risk scores. This study found that high-risk patients exhibited significantly poorer overall survival in both the training and validation datasets. The nomogram integrating the risk score and clinical factors showed strong predictive performance. High-risk patients demonstrated reduced immune cell infiltration, altered expression of immune checkpoints and immunosuppressive factors, and a distinct m6A modification pattern, suggesting a higher likelihood of immune escape. This study also revealed that the risk model effectively predicted sensitivity to multiple anticancer drugs. Conclusion: This study developed a robust ICD-related six-gene prognostic model for HCC that can accurately stratify patient risk, reflect the tumor immune landscape, and provide guidance for immunotherapy and personalized treatment strategies.

Indexed as

Biomarkers, TumorCarcinoma, HepatocellularImmunogenic Cell DeathLiver NeoplasmsFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansMaleNomogramsPrognosisTumor MicroenvironmentBiomarkers, Tumorhepatocellular carcinoma (HCC)Immunogenic cell death (ICD)prognosisrisk score

Identifiers

PMID40918463
PMCPMC12408862

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.