Evidence map›Paper›PMID 40913593›Full record

ArticleJournal of experimental botany2025

Time-Series Elemental Imaging Reveals CAX-Dependent Redistribution Patterns for Anoxia Recovery.

Shayan Sarkar, Matthew Barr, Ryan Tappero, Paras Aggarwal, Kendal D Hirschi, Tracy Punshon

Abstract read
In one paragraph

Article in Journal of experimental botany, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Shayan SarkarPediatrics-Nutrition, Children's Nutrition Research, Baylor College of Medicine, Houston, TX, 77030, USA.
Matthew BarrDepartment of Biological Sciences, Dartmouth College, Hanover, NH, 03755, USA.
Ryan TapperoPhoton Sciences Department, Brookhaven National Laboratory, Upton, NY, 11973, USA.
Paras AggarwalPediatrics-Nutrition, Children's Nutrition Research, Baylor College of Medicine, Houston, TX, 77030, USA.
Kendal D HirschiPediatrics-Nutrition, Children's Nutrition Research, Baylor College of Medicine, Houston, TX, 77030, USA.ORCID 0000-0001-6122-3222
Tracy PunshonDepartment of Biological Sciences, Dartmouth College, Hanover, NH, 03755, USA.ORCID 0000-0003-0782-446X

Funding

Laying the Groundwork for Web-based Elemental Imaging Software: The MicroAnalysis ToolkitR24GM141194 · NIGMS · DARTMOUTH COLLEGE · PI Brian P Jackson · 2021 to 2026
$3.1M
NIGMS NIH HHS R24 GM141194
6 · The paper itself

Abstract

Flooding-induced oxygen deprivation (anoxia) is a challenge to plant survival, necessitating adaptive mechanisms for recovery. This study investigates elemental redistribution during anoxia recovery using time-series elemental imaging to show changes in nutrient distribution. Focusing on the role of Cation/H⁺ Exchangers (CAXs) in Arabidopsis thaliana, we show how mutants deficient in specific CAX transporters (cax1 and the cax1-4 quadruple mutant; qKO) respond to anoxia and metal stress. Mutants had reduced lipid peroxidation and increased expression of flood-tolerance proteins during recovery. X-ray Fluorescence Microscopy (XFM) and Laser Ablation Inductively Coupled Plasma Mass Spectrometry (LA-ICP-MS) were used to show elemental redistribution over time. In wild-type plants (Col-0), post-anoxia elemental distribution resembled the elemental distribution of CAX mutants under normoxic conditions, suggesting CAX-mediated elemental distribution before anoxia enables faster recovery post-anoxia, rather than affecting remobilization post-anoxia. While CAX mutants had altered tolerance to excess manganese and copper, leaf metal distribution during anoxia was not altered. These findings introduce the potential utility of time-series elemental imaging to show stress response phenotypes and the importance of elemental distribution to anoxia recovery. The novelty of this work lies in resolving spatial distribution patterns in a non-static system to gain insight into mechanisms of stress resilience in plants.

Indexed as

AnoxiaArabidopsisCalciumTransportX-ray fluorescence microscopy

Identifiers

PMID40913593
PMCPMC13271169

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.