Evidence map›Paper›PMID 40913159›Full record

ArticleNature materials2025

Local photocrosslinking of native tissue matrix regulates lung epithelial cell mechanosensing and function.

Donia W Ahmed, Matthew L Tan, Yuchen Liu, Jackson Gabbard, Esther Gao, Avinava Roy, Michael M Hu, Firaol S Midekssa, Miriam Stevens, Fulei Wuchu and 8 more

Abstract read
In one paragraph

Article in Nature materials, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Mechanobiology and Resolution of Lung Fibrosis.Annual review of physiology · 2026
    Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Donia W Ahmed *Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI, USA.
Matthew L Tan *Department of Materials Science and Engineering, University of Michigan, Ann Arbor, MI, USA.ORCID 0000-0002-0176-8615
Yuchen LiuSchool of Biomedical Engineering, Science and Health Systems, Drexel University, Philadelphia, PA, USA.
Jackson GabbardDepartment of Biomedical Engineering, University of Michigan, Ann Arbor, MI, USA.
Esther GaoDepartment of Biomedical Engineering, University of Michigan, Ann Arbor, MI, USA.
Avinava RoyDepartment of Materials Science and Engineering, University of Michigan, Ann Arbor, MI, USA.
Michael M HuDepartment of Biomedical Engineering, University of Michigan, Ann Arbor, MI, USA.ORCID 0000-0003-3979-0196
Firaol S MidekssaDepartment of Biomedical Engineering, University of Michigan, Ann Arbor, MI, USA.ORCID 0009-0007-2260-1690
Miriam StevensDepartment of Biomedical Engineering, University of Michigan, Ann Arbor, MI, USA.
Fulei WuchuDepartment of Biomedical Engineering, University of Michigan, Ann Arbor, MI, USA.ORCID 0000-0002-7772-7449
Minal NenwaniDepartment of Biomedical Engineering, University of Michigan, Ann Arbor, MI, USA.
Jingyi XiaDepartment of Biomedical Engineering, University of Michigan, Ann Arbor, MI, USA.
Adam AbrahamDepartment of Orthopedics, University of Michigan, Ann Arbor, MI, USA.ORCID 0000-0003-2131-5178
Deepak NagrathDepartment of Biomedical Engineering, University of Michigan, Ann Arbor, MI, USA.ORCID 0000-0002-8999-2282
Lin HanSchool of Biomedical Engineering, Science and Health Systems, Drexel University, Philadelphia, PA, USA.ORCID 0000-0003-4180-1288
Rachel L ZemansCellular and Molecular Biology Program, University of Michigan, Ann Arbor, MI, USA.ORCID 0000-0003-3537-9869
Brendon M BakerDepartment of Biomedical Engineering, University of Michigan, Ann Arbor, MI, USA.ORCID 0000-0002-2785-1070
Claudia LoebelDepartment of Materials Science and Engineering, University of Michigan, Ann Arbor, MI, USA. loebelcl@seas.upenn.edu.ORCID 0000-0002-3140-5663

Funding

PULMONARY CELLULAR AND MOLECULAR BIOLOGY TRAININGT32HL007749 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Robert Pickett Dickson · 1993 to 2026
$19.9M
Mechanisms of Alveolar Homeostasis, Injury, Regeneration, and FibrosisR35HL160770 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Rachel Lynne Zemans · 2022 to 2026
$4.3M
Cellular Biotechnology Training Program (CBTP) - Years 31-35T32GM145304 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Guizhi Zhu · 2022 to 2026
$2.6M
Implementing the nascent ECM into the dynamic reciprocity of cell-ECM interactionsR35GM157063 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI Claudia Loebel · 2025 to 2026
$813k
Mechanics of fibrosis in 3D biomimetic extracellular matricesR00HL124322 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BAKER, BRENDON M · 2017 to 2019
$747k
Engineered alveolar organoids to understand ECM signalingR00HL151670 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LOEBEL, CLAUDIA · 2021 to 2023
$747k
Mechanisms of Impaired Epithelial Regeneration and Fibrosis After Silica Dust InhalationR56ES035710 · NIEHS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ZEMANS, RACHEL LYNNE · 2024 to 2024
$527k
NHLBI NIH HHS R00 HL124322NHLBI NIH HHS R00 HL151670NHLBI NIH HHS R35 HL160770NHLBI NIH HHS T32 HL007749NIEHS NIH HHS R56 ES035710NIGMS NIH HHS R35 GM157063NIGMS NIH HHS T32 GM145304
6 · The paper itself

Abstract

Within most tissues, the extracellular microenvironment provides mechanical cues that guide cell fate and function. Changes in the extracellular matrix such as aberrant deposition, densification and increased crosslinking are hallmarks of late-stage fibrotic diseases that often lead to organ dysfunction. Biomaterials have been widely used to mimic the mechanical properties of the fibrotic matrix and study pathophysiologic cell function. However, the initiation of fibrosis has largely been overlooked, due to challenges in recapitulating early stages of disease progression within the native extracellular microenvironment. Here, using visible-light-mediated photochemistry, we induced local crosslinking and stiffening of extracellular matrix proteins within ex vivo mouse and human lung tissue. In ex vivo lung tissue of epithelial cell lineage-traced mice, local matrix crosslinking mimicked early fibrotic lesions that increased alveolar epithelial cell mechanosensing, differentiation, and nascent protein deposition and remodelling. However, the inhibition of cytoskeletal tension, mechanosensitive signalling pathways or integrin engagement reduced epithelial cell spreading and differentiation. Our findings emphasize the role of local extracellular matrix crosslinking and nascent protein deposition in early stage tissue fibrosis and have implications for ex vivo disease modelling and applications to other tissues.

Indexed as

Cross-Linking ReagentsEpithelial CellsExtracellular MatrixLungMechanotransduction, CellularAnimalsCell DifferentiationExtracellular Matrix ProteinsHumansLightMiceCross-Linking ReagentsExtracellular Matrix Proteins

Identifiers

PMID40913159
PMCPMC13020898

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.