Evidence map›Paper›PMID 40912695›Full record

Observational studyBMJ open gastroenterology2025

Identification of robust associations between admission microbiome profiles and complications of acute pancreatitis.

Hannah S Pauw, Hester C Timmerhuis, Marc G Besselink, Yama Issa, Marco Bruno, Pieter Jan Floris de Jonge, Harry van Goor, Erwin-Jan M van Geenen, Rutger Quispel, Wim van de Vrie and 19 more

Abstract readMulticenter StudyObservational Study
In one paragraph

Observational study in BMJ open gastroenterology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Antibiotic-associatedGut microbes · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors.

Hannah S Pauw *Surgery, St Antonius Hospital, Nieuwegein, Utrecht, The Netherlands.ORCID http://orcid.org/0009-0003-2487-8192
Hester C Timmerhuis *Research & Development, St Antonius Hospital, Nieuwegein, The Netherlands.
Marc G BesselinkSurgery, Amsterdam UMC Locatie AMC, Amsterdam, Noord Holland, The Netherlands.
Yama IssaSurgery, Amsterdam UMC Location AMC, Amsterdam, The Netherlands.
Marco BrunoGastroenterology and Hepatology, Erasmus Medical Centre, Rotterdam, The Netherlands.
Pieter Jan Floris de JongeGastroenterology and Hepatology, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands.
Harry van GoorSurgery, Radboud University Medical Centre, Nijmegen, The Netherlands.
Erwin-Jan M van GeenenGastroenterology and Hepatology, Radboud University Medical Center, Nijmegen, Gelderland, The Netherlands.
Rutger QuispelGastroenterology and Hepatology, Reinier de Graaf Gasthuis, DELFT, Zuid-Holland, The Netherlands.
Wim van de VrieGastroenterology, Albert Schweitzer Ziekenhuis, Dordrecht, The Netherlands.
Adriaan TanGastroenterology, Canisius Wilhelmina Hospital, Nijmegen, The Netherlands.
Muhammed HadithiGastroenterology and Hepatology, Maasstad Hospital, Rotterdam, Zuid-Holland, The Netherlands.
Niels G VennemanGastroenterology and Hepatology, Medical Spectrum Twente, Enschede, The Netherlands.
J M JansenGastroenterology, Onze Lieve Vrouwe Gasthuis, Amsterdam, The Netherlands.
Ben J WittemanGastroenterology and Hepatology, Hospital Gelderse Vallei, Ede, The Netherlands.
Matthijs P SchwartzInternal Medicine and Gastroenterology, Meander Medical Center, Amersfoort, The Netherlands.
Roy L J van WanrooijAmsterdam Gastroenterology Endocrinology Metabolism, Amsterdam, Noord-Holland, The Netherlands.ORCID http://orcid.org/0000-0003-0477-4532
Rogier P VoermansAmsterdam Gastroenterology Endocrinology Metabolism, Amsterdam, Noord-Holland, The Netherlands.ORCID http://orcid.org/0000-0002-9969-019X
Alexander C PoenGastroenterology and Hepatology, Isala Clinics, Zwolle, The Netherlands.
Peter van DuijvendijkSurgery, Gelre Hospitals, Apeldoorn, The Netherlands.
Marie Paule G F AntenGastroenterology and Hepatology, Franciscus Gasthuis, Rotterdam, ZH, The Netherlands.
Tessa RömkensGastroenterology and hepatology, Jeroen Bosch Ziekenhuis, Den Bosch, Noord-Brabant, The Netherlands.
Elske SieswerdaMedical Microbiology, Utrecht University, Utrecht, The Netherlands.
Merel M TielemansGastroenterology and Hepatology, Bravis Hospital, Bergen op Zoom, The Netherlands.
Jeanin E van HooftGastroenterology & Hepatology, Leiden University Medical Center, Leiden, The Netherlands.
Marja A BoermeesterAmsterdam Gastroenterology Endocrinology Metabolism, Amsterdam, Noord-Holland, The Netherlands.
Robert C VerdonkGastroenterology & Hepatology, Sint Antonius Hospital, Nieuwegein, The Netherlands.
Hjalmar C van SantvoortSurgery, St Antonius Hospital, Nieuwegein, Utrecht, The Netherlands.
Fons F van den BergAmsterdam Gastroenterology Endocrinology Metabolism, Amsterdam, Noord-Holland, The Netherlands f.f.vandenberg@amsterdamumc.nl.ORCID http://orcid.org/0000-0001-6494-4287

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivePatients with acute pancreatitis show reduced gut microbiome diversity and high abundance of pathogenic bacteria compared with healthy subjects. Admission microbiome profiles are increasingly linked to severity, but methodology and study quality hamper interpretation. Our aim was to investigate whether admission microbiome analysis provides robust and reproducible associations with severity and complications of acute pancreatitis.

methodsPatients with acute pancreatitis were prospectively enrolled from 20 Dutch hospitals (2019-2022). Admission saliva and rectal samples from 276 patients underwent 16S rDNA sequencing for microbiome profiling. Subgroups were defined based on a literature search. The microbiota endpoints (alpha- and beta-diversity, and genus abundance) were compared across subgroups and with previous studies. Robustness of the significant associations was classified as 'moderate' or 'high' in case of statistical significance in, respectively, 2 or ≥3 differential abundance models.

resultsRectal alpha diversity (Shannon Index 3.55 vs 3.63, p=0.026) was decreased in necrotising (n=49) versus oedematous pancreatitis (n=218). Microbiota communities of either saliva or rectal samples differed in all the subgroups. In total, 270 (rectal) and 138 (saliva) genera were associated with severity or complications, of which 35 and 3 (

conclusionThree admission microbiome taxa associated with severity and complications were highly robust, although their biological relevance remains unclear. This study also shows the lack of replicable findings of admission microbiome associations, highlighting the need for longitudinal studies to establish temporal relationships between microbiome changes and disease progression.

Indexed as

Gastrointestinal MicrobiomePancreatitisAcute DiseaseAdultAgedFemaleHumansMaleMiddle AgedNetherlandsPatient AdmissionProspective StudiesRectumRNA, Ribosomal, 16SSalivaSeverity of Illness IndexRNA, Ribosomal, 16SACUTE PANCREATITISINTESTINAL MICROBIOLOGYPANCREATITIS

Identifiers

PMID40912695
PMCPMC12414194

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.