Evidence map›Paper›PMID 40911260›Full record

ArticleMolecular biology reports2025

Genome-wide characterization and expression analysis of the chitinase gene family in chickpea (Cicer arietinum L.) for fungal stress resistance.

Samra Irum, Mustafa Cilkiz, Noorah Al-Kubaisi, Mohamed S Elshikh, Rashid Iqbal

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular biology reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Samra IrumDepartment of Biological Sciences, International Islamic University, Islamabad, Pakistan. samrairum2@gmail.com.
Mustafa CilkizGeneral Directorate of Agricultural Research and Policies, Transitional Zone Agricultural Research Institute, Eskisehir, Turkey.
Noorah Al-KubaisiDepartment of Botany and Microbiology, College of Science, King Saud University, Riyadh, 11451, Saudi Arabia.
Mohamed S ElshikhDepartment of Botany and Microbiology, College of Science, King Saud University, Riyadh, 11451, Saudi Arabia.
Rashid IqbalDepartment of Agronomy, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur, Bahawalpur, 63100, Pakistan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chitinases, enzymes responsible for hydrolyzing chitin, a significant component of fungal cell walls, play a crucial role in plant defense mechanisms, growth, symbiotic relationships, and stress resistance. In this study, we identified 27 chitinase genes in chickpeas (CaChi) and classified them into five classes based on phylogenetic analysis. Overall, chitinase genes are clustered on eight chromosomes. Among these chromosomes (Chr), Chr-2 displayed the maximum number of genes. Meanwhile, promoter analysis revealed that cis-elements are involved in responses to phytohormones, biotic stress, plant growth, and development. Tissue-based expression analysis indicated that CaChi genes are predominantly expressed in the seedling and floral parts. Furthermore, qRT-PCR analysis revealed that CaChi genes play diverse roles in plant-environment interactions. Notably, several CaChi members were strongly induced by Fusarium oxysporum f. sp. and fourteen genes (CaChi20, CaChi25, CaChi11, CaChi3, CaChi16, CaChi14, CaChi1, CaChi4, CaChi5, CaChi8, CaChi9, CaChi21, CaChi18, CaChi13) exhibited elevated expression levels after post-inoculation, depicting a significant function of Chi genes in chickpea resistance to Fusarium wilt. These findings enhance understanding of the chitinase family in chickpea crops and clarify the functions of chickpea chitinase in response to fungal stress.

Indexed as

ChitinasesCicerDisease ResistanceFusariumGene Expression ProfilingGene Expression Regulation, PlantGenome, PlantMultigene FamilyPhylogenyPlant DiseasesPlant ProteinsStress, PhysiologicalChitinasesPlant ProteinsChickpeaChitinase genesExpression analysisFusarium oxysporumGenome-wide characterization

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.