Evidence map›Paper›PMID 40909469›Full record

ArticlebioRxiv : the preprint server for biology2025

5' cap sequestration is required for sensing of unspliced HIV-1 RNA by MDA5.

Ivy K Hughes, Siarhei Kharytonchyk, Sita Ramaswamy, Sallieu Jalloh, James B Hood, Xianbao He, Andrew J Henderson, Hisashi Akiyama, Alice Telesnitsky, Suryaram Gummuluru

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Ivy K HughesDepartment of Virology, Immunology, & Microbiology, Boston University Chobanian & Avedisian School of Medicine.
Siarhei KharytonchykDepartment of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor.
Sita RamaswamyDepartment of Virology, Immunology, & Microbiology, Boston University Chobanian & Avedisian School of Medicine.
Sallieu JallohDepartment of Virology, Immunology, & Microbiology, Boston University Chobanian & Avedisian School of Medicine.
James B HoodDepartment of Virology, Immunology, & Microbiology, Boston University Chobanian & Avedisian School of Medicine.
Xianbao HeDepartment of Medicine, Section of Infectious Diseases, Boston Medical Center.
Andrew J HendersonDepartment of Virology, Immunology, & Microbiology, Boston University Chobanian & Avedisian School of Medicine.
Hisashi AkiyamaDepartment of Virology, Immunology, & Microbiology, Boston University Chobanian & Avedisian School of Medicine.ORCID 0000-0001-9228-0465
Alice TelesnitskyDepartment of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor.ORCID 0000-0001-9878-5931
Suryaram GummuluruDepartment of Virology, Immunology, & Microbiology, Boston University Chobanian & Avedisian School of Medicine.ORCID 0000-0002-8606-8481

Funding

Translational ScienceP30AI042853 · NIAID · MIRIAM HOSPITAL · PI CURT G BECKWITH, DEBBIE M. CHENG · 1998 to 2026
$51.7M
Center for Structural Biology of HIV RNAU54AI170660 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ALICE TELESNITSKY · 2022 to 2026
$32.1M
Persistent HIV-1 expression and microglia dysfunctionR01DA055488 · NIDA · BOSTON MEDICAL CENTER · PI GUMMULURU, SURYARAM, HENDERSON, ANDREW J · 2021 to 2025
$3.7M
Synergistic Mechanisms of chronic Innate Immune Activation in Microglia by Opiates and HIV InfectionR01DA051889 · NIDA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI CHENG, CHRISTINE, GUMMULURU, SURYARAM · 2020 to 2024
$3.5M
Defective HIV proviruses and Persistent Innate Immune ActivationR01AI187175 · NIAID · BOSTON MEDICAL CENTER · PI SURYARAM GUMMULURU, Andrew J Henderson · 2024 to 2026
$2.4M
Mechanisms of Persistent Inflammasome Activation in Myeloid CellsR01DA059952 · NIDA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI SURYARAM GUMMULURU, Andrew J Henderson · 2024 to 2026
$2.3M
NIAID NIH HHS P30 AI042853NIAID NIH HHS R01 AI187175NIAID NIH HHS U54 AI170660NIDA NIH HHS R01 DA051889NIDA NIH HHS R01 DA055488NIDA NIH HHS R01 DA059952
6 · The paper itself

Abstract

Heterogenous transcription start site (TSS) usage dictates the structure and function of unspliced HIV-1 RNAs (usRNA). We and others have previously reported that expression and Rev/CRM1-mediated nuclear export of HIV-1 usRNA in macrophages activates MDA5, MAVS, and innate immune signaling cascades. In this study, we reveal that MDA5 sensing of viral usRNA is strictly determined by TSS, 5' leader structure, and RNA function. We show that cap-sequestered HIV-1 usRNAs (

Identifiers

PMID40909469
PMCPMC12407712

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.