Evidence map›Paper›PMID 40906967›Full record

ArticleThe journal of physical chemistry letters2025

Chiral Matching between Nucleic Acids and Polypeptides Facilitates Liquid-Liquid Phase Separation.

Pravin Pokhrel, Zhilei Zhang, Jiahao Ji, Sajan Shakya, Jaren Jenyk, Alyssa Lower, Maxwell Janssen, Hanbin Mao

Abstract read
In one paragraph

Article in The journal of physical chemistry letters, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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0 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Pravin PokhrelDepartment of Chemistry and Biochemistry, Kent State University, Kent, Ohio 44242, United States.ORCID 0000-0003-4259-6087
Zhilei ZhangDepartment of Chemistry and Biochemistry, Kent State University, Kent, Ohio 44242, United States.
Jiahao JiDepartment of Chemistry and Biochemistry, Kent State University, Kent, Ohio 44242, United States.ORCID 0000-0002-6189-7750
Sajan ShakyaDepartment of Chemistry and Biochemistry, Kent State University, Kent, Ohio 44242, United States.
Jaren JenykDepartment of Chemistry and Biochemistry, Kent State University, Kent, Ohio 44242, United States.ORCID 0009-0005-1174-988X
Alyssa LowerDepartment of Biochemistry and Molecular Biology, The College of Wooster, Wooster, Ohio 44691, United States.
Maxwell JanssenDepartment of Biochemistry, Lawrence University, Appleton, Wisconsin 54911, United States.
Hanbin MaoDepartment of Chemistry and Biochemistry, Kent State University, Kent, Ohio 44242, United States.ORCID 0000-0002-6720-9429

Funding

Specific Recognition of G-quadruplexesR01CA236350 · NCI · KENT STATE UNIVERSITY · PI MAO, HANBIN · 2018 to 2022
$1.6M
Supplemental Request for Mechanical Modulation of Cell Migrations by DNA NanoassembliesR01CA252827 · NCI · KENT STATE UNIVERSITY · PI Hanbin Mao · 2023 to 2026
$1.4M
NCI NIH HHS R01 CA236350NCI NIH HHS R01 CA252827
6 · The paper itself

Abstract

Liquid-liquid phase separation (LLPS) is a newly discovered phenomenon to modulate a multitude of cellular functions. Despite its importance, the full evolution mechanism of LLPS starting from intramolecular interactions to intermolecular condensations has yet to be revealed. In this study, we investigated a representative LLPS formed between negatively charged nucleic acids poly(G-quadruplex) and positively charged peptides poly(lysine). Harnessing the chiral nature of these two components, we elucidated an exquisite chirality effect on the LLPS formation using optical-tweezer-based single-molecule force spectroscopy, which revealed four states of intramolecular condensation at low component concentrations, and a microscopy-based ensemble clouding assay, which, in a complementary manner, discloses the shape and density of macroscopic intermolecular condensates at higher concentrations. We found that, with increasing concentrations, intramolecular interactions evolve to intermolecular condensations, resulting in liquid-like condensates followed by solid-like droplets. The entire evolution was facilitated by the matching chirality between poly(G-quadruplex) and poly(lysine), which confirmed that the intermolecular interaction is the driving force for the LLPS process. The elucidation of the full LLPS evolution offers ample opportunities to interfere with the LLPS process via chirality factors, which provides new avenues for targeted therapeutics and development of functional biomaterials.

Indexed as

Nucleic AcidsPeptidesPolylysineG-QuadruplexesPhase SeparationStereoisomerismNucleic AcidsPeptidesPolylysine

Identifiers

PMID40906967
PMCPMC12959371

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.