Evidence map›Paper›PMID 40906612›Full record

ArticlePLoS biology2025

Quantitative modeling of multi-signal quorum-sensing maps environment to bacterial regulatory responses.

Stephen Thomas, Ayatollah S El-Zayat, James Gurney, Jennifer Rattray, Sam P Brown

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Article in PLoS biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Frontiers in microbiology · 2025
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Stephen ThomasSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, GeorgiaUnited States of America.ORCID 0000-0003-0773-0236
Ayatollah S El-ZayatDepartment of Microbiology, Faculty of Agriculture, Cairo University, Giza, Egypt.
James GurneyDepartment of Biology, College of Arts and Sciences, Georgia State University, Atlanta, GeorgiaUnited States of America.
Jennifer RattraySchool of Biological Sciences, Georgia Institute of Technology, Atlanta, GeorgiaUnited States of America.
Sam P BrownSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, GeorgiaUnited States of America.ORCID 0000-0003-1892-9275

Funding

National Science Foundation DEB 2406985National Science Foundation MCB 2321502U.S. Army W9IINF230140
6 · The paper itself

Abstract

Bacterial quorum sensing is often mediated by multiple signaling systems that interact with each other. The quorum-sensing systems of Pseudomonas aeruginosa, for example, are considered hierarchical, with the las system acting as a master regulator. By experimentally controlling the concentration of auto-inducer signals in a signal deficient strain (PAO1ΔlasIΔrhlI), we show that the two primary quorum-sensing systems-las and rhl-act reciprocally rather than hierarchically. Just as the las system's 3‑oxo‑C12‑HSL can induce increased expression of rhlI, the rhl system's C4‑HSL increases the expression level of lasI. We develop a mathematical model to quantify relationships both within and between the las and rhl quorum-sensing systems and the downstream genes they influence. The results show that not only do the systems interact in a reciprocal manner, but they do so asymmetrically, cooperatively, and nonlinearly, with the combination of C4‑HSL and 3‑oxo‑C12‑HSL increasing expression level far more than the sum of their individual effects. We next extend our parameterized mathematical model to generate quantitative predictions on how a QS-controlled effector gene (lasB) responds to changes in wildtype bacterial stationary phase density and find close quantitative agreement with an independent dataset. Finally, we use our parameterized model to assess how changes in multi-signal interactions modulate functional responses to variation in social (population density) and physical (mass transfer) environment and demonstrate that a reciprocal architecture is more responsive to density and more robust to mass transfer than a strict hierarchy.

Indexed as

Models, BiologicalPseudomonas aeruginosaQuorum SensingSignal TransductionBacterial ProteinsGene Expression Regulation, BacterialTrans-ActivatorsBacterial ProteinsLasI protein, Pseudomonas aeruginosaTrans-Activators

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.