Evidence map›Paper›PMID 40901079›Full record

ArticleFrontiers in microbiology2025

Evaluation of targeted next-generation sequencing for microbiological diagnosis of acute lower respiratory infection.

Fengzhen Yang, Lihua Jiang, Qingmei Cao, Maoli Yi, Qi Zhao

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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  5. Clinical features and prognostic factors ofFrontiers in medicine · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Fengzhen Yang *Department of Laboratory Medicine, Qingdao University Affiliated Yantai Yuhuangding Hospital, Yantai, China.
Lihua Jiang *Department of Laboratory Medicine, Qingdao University Affiliated Yantai Yuhuangding Hospital, Yantai, China.
Qingmei CaoDepartment of Laboratory Medicine, Qingdao University Affiliated Yantai Yuhuangding Hospital, Yantai, China.
Maoli YiDepartment of Laboratory Medicine, Qingdao University Affiliated Yantai Yuhuangding Hospital, Yantai, China.
Qi ZhaoDepartment of Laboratory Medicine, Qingdao University Affiliated Yantai Yuhuangding Hospital, Yantai, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: To evaluate the performance of targeted next-generation sequencing (tNGS) in pathogen detection in acute lower respiratory infection. Methods: The retrospective study was conducted between July 2023 and May 2024 at the Yantai Yuhuangding Hospital. Patients with acute lower respiratory infections were included. Qualified sputum or bronchoalveolar lavage fluid samples were collected for tNGS and conventional microbiological tests(CMTs), including culture, staining, polymerase chain reaction (PCR), and reverse transcription-PCR (RT-PCR). The time required and cost were counted. Results: A total of 968 patients were enrolled. Study analysis discovered 1,019 strains of bacteria, 259 strains of fungi, 302 strains of viruses, 76 strains of Conclusion: Compared to traditional methods, tNGS had higher sensitivity in detecting bacteria, fungi, viruses, and other pathogens in acute lower respiratory infection, and also had the advantages of timeliness and cost-effectiveness, making it a promising method for guiding clinical diagnosis.

Indexed as

acute lower respiratory infectionmicrobiological diagnosismicroorganismnext-generation sequencingresistance gene

Identifiers

PMID40901079
PMCPMC12399591

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.