Evidence map›Paper›PMID 40897845›Full record

ArticleNature chemical biology2026

pH variations enable guanine crystal formation within iridosomes.

Zohar Eyal, Rachael Deis, Anna Gorelick-Ashkenazi, Yuval Barzilay, Yonatan Broder, Asher Perry Kellum, Neta Varsano, Michal Hartstein, Andrea Sorrentino, Ron Rotkopf and 7 more

Abstract read
In one paragraph

Article in Nature chemical biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Control Strategies in Guanine Biocrystallization.Angewandte Chemie (International ed. in English) · 2026
    Review
  4. Review
  5. Lysosome-related organelles orchestrate guanine crystal formation in pigment cells.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  6. The Molecular Basis of Growth Control in Guanine Crystals.Small (Weinheim an der Bergstrasse, Germany) · 2026
    Article
  7. Acid enables biogenic crystallization.Nature chemical biology · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Zohar Eyal *Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.ORCID 0000-0002-8966-0624
Rachael Deis *Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.ORCID 0000-0002-3073-1395
Anna Gorelick-Ashkenazi *Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Yuval BarzilayDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.ORCID 0000-0002-2489-8834
Yonatan BroderDepartment of Biomolecular Sciences, Weizmann Institute of Science, Rehovot, Israel.ORCID 0009-0000-1596-0176
Asher Perry KellumDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Neta VarsanoDepartment of Chemical Research Support, Weizmann Institute of Science, Rehovot, Israel.
Michal HartsteinDepartment of Materials and Interfaces, Weizmann Institute of Science, Rehovot, Israel.
Andrea SorrentinoMistral Beamline, ALBA Synchrotron Light Source, Cerdanyola del Vallès, Spain.
Ron RotkopfDepartment of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, Israel.ORCID 0000-0001-9503-7348
Ifat Kaplan-AshiriDepartment of Chemical Research Support, Weizmann Institute of Science, Rehovot, Israel.
Katya RechavDepartment of Chemical Research Support, Weizmann Institute of Science, Rehovot, Israel.ORCID 0000-0003-4664-5704
Rebecca MetzlerDepartment of Physics and Astronomy, Colgate University, Hamilton, NY, USA.ORCID 0000-0001-9196-9084
Lothar HoubenDepartment of Chemical Research Support, Weizmann Institute of Science, Rehovot, Israel.
Leeor KronikDepartment of Materials and Interfaces, Weizmann Institute of Science, Rehovot, Israel.
Peter RezDepartment of Physics, Arizona State University, Tempe, AZ, USA.ORCID 0000-0003-3424-9042
Dvir GurDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel. Dvir.gur@weizmann.ac.il.ORCID 0000-0002-9140-1621

Funding

EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) 101077470 CRYSTALCELLIsrael Science Foundation (ISF) 691/22
6 · The paper itself

Abstract

Many animals produce vivid colors by reflecting and amplifying light with stacked guanine crystals within membrane-bound organelles called iridosomes. While the presence of guanine crystals in iridosomes is well documented, the mechanisms facilitating the accumulation of water-insoluble guanine and driving its crystallization remain unclear. Here we used cryo-electron microscopy, live-cell pH imaging, pharmacological perturbations and spectroscopy to study iridosome maturation in zebrafish. Cryo-electron and synchrotron-based soft X-ray microscopies revealed that amorphous guanine initially accumulates in early-stage iridosomes in its protonated state. Live-cell imaging with a pH sensor demonstrated that early iridosomes are acidic, with pH gradually neutralizing during development. Inhibiting V-ATPase disrupted this acidification and significantly reduced crystal formation, indicating its role in pH regulation. Our findings reveal insights into the molecular mechanisms facilitating guanine formation within iridosomes, emphasizing the pivotal role of pH alternations in the precise formation of biogenic crystals.

Indexed as

GuanineOrganellesAnimalsCryoelectron MicroscopyCrystallizationHydrogen-Ion ConcentrationZebrafishGuanine

Identifiers

PMID40897845
PMCPMC12727525

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.