Evidence map›Paper›PMID 40897842›Full record

ArticleNature chemistry2025

Carbon-to-nitrogen atom swap enables direct access to benzimidazoles from drug-like indoles.

Ann-Sophie K Paschke, Yannick Brägger, Bence B Botlik, Erich Staudinger, Ori Green, Bill Morandi

Abstract read
In one paragraph

Article in Nature chemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
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  5. Article
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  7. Article
  8. Pyridine C─N Transposition via Cycloaddition-Cycloreversion.Angewandte Chemie (International ed. in English) · 2026
    Article
  9. Review
  10. Shape-Conserving Atom Replacements.Chemical reviews · 2026
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ann-Sophie K PaschkeLaboratorium für Organische Chemie, ETH Zürich, Zurich, Switzerland.ORCID 0009-0000-4918-1840
Yannick BräggerLaboratorium für Organische Chemie, ETH Zürich, Zurich, Switzerland.ORCID 0000-0002-8542-304X
Bence B BotlikLaboratorium für Organische Chemie, ETH Zürich, Zurich, Switzerland.ORCID 0000-0002-7742-8756
Erich StaudingerLaboratorium für Organische Chemie, ETH Zürich, Zurich, Switzerland.ORCID 0009-0005-6545-1018
Ori GreenLaboratorium für Organische Chemie, ETH Zürich, Zurich, Switzerland.ORCID 0000-0003-0822-2508
Bill MorandiLaboratorium für Organische Chemie, ETH Zürich, Zurich, Switzerland. bill.morandi@org.chem.ethz.ch.ORCID 0000-0003-3968-1424

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ability to selectively edit organic molecules at the atomic level has the potential to streamline lead discovery and optimization in the pharmaceutical and agrochemical industry. While numerous atom insertion and deletion reactions have recently been reported, examples of single atom swaps remain scarce due to the challenge of orchestrating the selective cleavage and formation of multiple chemical bonds around the same atom. Here we report a method for the carbon-to-nitrogen atom swap in N-alkyl indoles, allowing the direct conversion of indoles to the corresponding benzimidazoles. The reaction leverages the innate reactivity of the indole scaffold to engage in an initial oxidative cleavage step, followed by oxidative amidation, Hofmann-type rearrangement and cyclization. This complex sequence of steps is mediated by the simple combination of commercially available phenyliodine(III) diacetate and ammonium carbamate as the nitrogen atom source. The reaction tolerates a wide range of functional groups, which is demonstrated by the interconversion of 15 drug-like molecules, implying its immediate applicability across a wide range of discovery programmes.

Indexed as

BenzimidazolesCarbonIndolesNitrogenCyclizationMolecular StructureOxidation-ReductionBenzimidazolesCarbonIndolesNitrogen

Identifiers

PMID40897842
PMCPMC12580326

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.