Evidence map›Paper›PMID 40896141›Full record

ArticleData in brief2025

A high-throughput phenotyping dataset for GWAS analysis of maize under combined drought and heat stress.

Rongli Shi, Ana López-Malvar, Dominic Knoch, Henning Tschiersch, Marc C Heuermann, Salar Shaaf, Delphine Madur, Rogelio Santiago, Carlotta Balconi, Elisabetta Frascaroli and 5 more

Abstract read
In one paragraph

Article in Data in brief, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Rongli ShiLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), OT Gatersleben, 06466 Seeland, Germany.
Ana López-MalvarLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), OT Gatersleben, 06466 Seeland, Germany.
Dominic KnochLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), OT Gatersleben, 06466 Seeland, Germany.
Henning TschierschLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), OT Gatersleben, 06466 Seeland, Germany.
Marc C HeuermannLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), OT Gatersleben, 06466 Seeland, Germany.
Salar ShaafLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), OT Gatersleben, 06466 Seeland, Germany.
Delphine MadurUniversité Paris-Saclay, INRAE, CNRS, AgroParisTech, Génétique Quantitative et Evolution (GQE) - Le Moulon, 91190 Gif-Sur-Yvette, France.
Rogelio SantiagoMisión Biológica de Galicia (CSIC), Carballeira 8, 36143 Pontevedra, Spain.
Carlotta BalconiResearch Centre for Cereal and Industrial Crops (CREA), Via Stezzano, 24, 24126 Bergamo, Italy.
Elisabetta FrascaroliDepartment of Agricultural and Food Sciences, Università di Bologna, Viale Fanin, 44 40127 Bologna, Italy.
Sekip ErdalBati Akdeniz Agricultural Research Institute, Antalya, Türkiye.
Carine PalaffreUnité Expérimentale du Maïs, INRAE, 2297 Route de l'INRA, F-40390 Saint-Martin-de-Hinx, France.
Alain CharcossetUniversité Paris-Saclay, INRAE, CNRS, AgroParisTech, Génétique Quantitative et Evolution (GQE) - Le Moulon, 91190 Gif-Sur-Yvette, France.
Pedro RevillaMisión Biológica de Galicia (CSIC), Carballeira 8, 36143 Pontevedra, Spain.
Thomas AltmannLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), OT Gatersleben, 06466 Seeland, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This dataset was generated to characterize the physiological and morphological mechanisms underlying tolerance and resilience to combined drought and heat stress using a panel of 106 Mediterranean maize inbred lines. To achieve this, high-throughput non-invasive phenotyping combined with genome-wide association analysis was applied to accurately capture the dynamic responses of the maize lines to stress and to dissect the genetic basis of maize tolerance and resilience. Two experiments were conducted under control (25/20 °C, 70 % field capacity (FC)) and stress conditions (35/25 °C, 30 % FC). Stress was applied from 18 to 32 DAS (days after sowing), followed by a recovery period under control conditions. Plants were grown under controlled air temperature and soil water content, and were harvested at 45 DAS. Throughout the cultivation period, multiple camera sensors captured images daily, allowing agronomic traits to be extracted for analysis. The dataset includes raw and processed images, phenotypic data obtained from these images, results of two photosynthesis related parameters, Genome-Wide Association Study (GWAS) results from one parameter as an example, and scripts used for data analysis. Additionally, metadata and a detailed description of the experimental setup are provided. This resource is suitable for researchers interested in stress phenotyping and quantitative genetics. It allows further exploration of genotype-by-environment interactions and integration with other omics datasets. The dataset provides a valuable foundation for studies aiming to understand and improve crop resilience to climate-related abiotic stresses.

Indexed as

DroughtHeatHigh-throughput phenotypingMediterranean germplasmPhotosynthesisVegetative growth

Identifiers

PMID40896141
PMCPMC12391738

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.